RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 PRRT4C9JH25 899 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 TACC1O75410 805 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 PRPF6O94906 941 aaKnown RBP12.19□□□□□ -0.46
TMEM258-208ENST00000545210 BMP15O95972 392 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 CST3P01034 146 aaPredicted RBP12.19□□□□□ -0.46
TMEM258-208ENST00000545210 SV2BQ7L1I2 683 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 MARCH9Q86YJ5 346 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 B3GALNT2Q8NCR0 500 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 SCFD1Q8WVM8 642 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 GABRG3Q99928 467 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 BBS2Q9BXC9 721 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 ZDHHC5Q9C0B5 715 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 NACA2Q9H009 215 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 CACNA2D2Q9NY47 1150 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 CCDC39Q9UFE4 941 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 CKAP5Q14008 2032 aa12.19□□□□□ -0.46
TMEM258-208ENST00000545210 URB1O60287 2271 aaKnown RBP12.18□□□□□ -0.46
TMEM258-208ENST00000545210 GOLGA4Q13439 2230 aaKnown RBP12.18□□□□□ -0.46
TMEM258-208ENST00000545210 MUC22E2RYF6 1773 aaPredicted RBP12.18□□□□□ -0.46
TMEM258-208ENST00000545210 A0A1B0GTW7 788 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 MEI4A8MW99 385 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 A8MXQ7 604 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 CACNG3O60359 315 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 TYRP14679 529 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 CD6P30203 668 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 PGFP49763 221 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 TUBP50607 506 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 TNNC1P63316 161 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 ALCAMQ13740 583 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 SURF1Q15526 300 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 WDR72Q3MJ13 1102 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 SNX30Q5VWJ9 437 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 RRAGBQ5VZM2 374 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 TPGS1Q6ZTW0 290 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 TRAPPC11Q7Z392 1133 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 WDR49Q8IV35 697 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 ZCCHC9Q8N567 271 aaKnown RBP12.18□□□□□ -0.46
TMEM258-208ENST00000545210 CRELD1Q96HD1 420 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 XPO6Q96QU8 1125 aaKnown RBP12.18□□□□□ -0.46
TMEM258-208ENST00000545210 DUSP9Q99956 384 aaKnown RBP12.18□□□□□ -0.46
TMEM258-208ENST00000545210 TRIM9Q9C026 710 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 MIR1-1HGQ9H1L0 117 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 GAREM1Q9H706 876 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 PANK4Q9NVE7 773 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 GMIPQ9P107 970 aa12.18□□□□□ -0.46
TMEM258-208ENST00000545210 KIAA1522Q9P206 1035 aaPredicted RBP12.18□□□□□ -0.46
TMEM258-208ENST00000545210 GOLGA8CPA6NN73 597 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 KIAA0391O15091 583 aaKnown RBP12.17□□□□□ -0.46
TMEM258-208ENST00000545210 CILPO75339 1184 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 ATXN1LP0C7T5 689 aaKnown RBP12.17□□□□□ -0.46
TMEM258-208ENST00000545210 DLATP10515 647 aaKnown RBP12.17□□□□□ -0.46
TMEM258-208ENST00000545210 NCAM1P13591 858 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 SLC5A3P53794 718 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 CYP4F3Q08477 520 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 HTR3DQ70Z44 454 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 TMPRSS7Q7RTY8 843 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 RDH13Q8NBN7 331 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 GLIS3Q8NEA6 775 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 DNASE2BQ8WZ79 361 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 BHMTQ93088 406 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 TOE1Q96GM8 510 aaKnown RBP12.17□□□□□ -0.46
TMEM258-208ENST00000545210 GPR174Q9BXC1 333 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 PRDM16Q9HAZ2 1276 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 TM7SF3Q9NS93 570 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 TOR4AQ9NXH8 423 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 HSPBP1Q9NZL4 362 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 WDR35Q9P2L0 1181 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 DKK4Q9UBT3 224 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 NXF1Q9UBU9 619 aaKnown RBP12.17□□□□□ -0.46
TMEM258-208ENST00000545210 FNDC3AQ9Y2H6 1198 aaKnown RBP12.17□□□□□ -0.46
TMEM258-208ENST00000545210 MYLKQ15746 1914 aa12.17□□□□□ -0.46
TMEM258-208ENST00000545210 TENM4Q6N022 2769 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 FRMD3A2A2Y4 597 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 TRABD2BA6NFA1 517 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 KCNJ18B7U540 433 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 GREM1O60565 184 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 TLR5O60602 858 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 CER1O95813 267 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 TBX18O95935 607 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 ZDHHC11BP0C7U3 371 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 TNNI1P19237 187 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 MATKP42679 507 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 DGKGP49619 791 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 BNC1Q01954 994 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 HLA-BQ31612 363 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 FUT11Q495W5 492 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 DCAF12L1Q5VU92 463 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 LARP1BQ659C4 914 aaKnown RBP12.16□□□□□ -0.46
TMEM258-208ENST00000545210 PAQR9Q6ZVX9 377 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 BRAPQ7Z569 592 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 FAM35AQ86V20 835 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 BAHD1Q8TBE0 780 aaPredicted RBP12.16□□□□□ -0.46
TMEM258-208ENST00000545210 RHBDD1Q8TEB9 315 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 HPS3Q969F9 1004 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 TMX3Q96JJ7 454 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 CLIC6Q96NY7 704 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 MED10Q9BTT4 135 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 PANK2Q9BZ23 570 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 DMAP1Q9NPF5 467 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms