RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 NBL1P41271 181 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 CXCL12P48061 93 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 CCR3P51677 355 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 DHCR24Q15392 516 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 ZNF528Q3MIS6 628 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 MIIPQ5JXC2 388 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 GJB7Q6PEY0 223 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 MAML2Q8IZL2 1156 aaPredicted RBP16.51■□□□□ 0.23
CCDC78-216ENST00000544996 SPEM1Q8N4L4 309 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 SECISBP2LQ93073 1101 aaKnown RBP16.51■□□□□ 0.23
CCDC78-216ENST00000544996 CHFRQ96EP1 664 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 ZSWIM1Q9BR11 485 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 CNGB3Q9NQW8 809 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 NUDT5Q9UKK9 219 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 STRIP2Q9ULQ0 834 aa16.51■□□□□ 0.23
CCDC78-216ENST00000544996 ZNF638Q14966 1978 aaKnown RBP16.5■□□□□ 0.23
CCDC78-216ENST00000544996 ATG13O75143 517 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 LETM1O95202 739 aaPredicted RBP16.5■□□□□ 0.23
CCDC78-216ENST00000544996 CYP17A1P05093 508 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 LCP1P13796 627 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 GNA15P30679 374 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 RGS7P49802 495 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 COG7P83436 770 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 APBA1Q02410 837 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 EFEMP1Q12805 493 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 FBXO43Q4G163 708 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 BTBD8Q5XKL5 378 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 FSTL4Q6MZW2 842 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 PMF1Q6P1K2 205 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 HTR3DQ70Z44 454 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 MIB1Q86YT6 1006 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 BBS7Q8IWZ6 715 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 ANKRD20A12PQ8NF67 263 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 CCDC26Q8TAB7 109 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 HSFY1Q96LI6 401 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 PHOX2BQ99453 314 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 NAT10Q9H0A0 1025 aaKnown RBP16.5■□□□□ 0.23
CCDC78-216ENST00000544996 OLA1Q9NTK5 396 aaKnown RBP16.5■□□□□ 0.23
CCDC78-216ENST00000544996 DNAJC12Q9UKB3 198 aa16.5■□□□□ 0.23
CCDC78-216ENST00000544996 MDM4O15151 490 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 THAP12O43422 761 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 CALCAP01258 141 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 ADH5P11766 374 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 MRE11P49959 708 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 MYL5Q02045 173 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 GAD2Q05329 585 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 MEA1Q16626 185 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 LY6G5CQ5SRR4 150 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 CDKAL1Q5VV42 579 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 RHBDF2Q6PJF5 856 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 Q6ZS52 159 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 C11orf57Q6ZUT1 292 aaPredicted RBP16.49■□□□□ 0.23
CCDC78-216ENST00000544996 SCML4Q8N228 414 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 RNF139Q8WU17 664 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 ZNF606Q8WXB4 792 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 SHC3Q92529 594 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 GOLGA1Q92805 767 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 FAM126AQ9BYI3 521 aaPredicted RBP16.49■□□□□ 0.23
CCDC78-216ENST00000544996 FBRSL1Q9HCM7 1045 aaKnown RBP16.49■□□□□ 0.23
CCDC78-216ENST00000544996 PRMT8Q9NR22 394 aaPredicted RBP16.49■□□□□ 0.23
CCDC78-216ENST00000544996 ST7Q9NRC1 585 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 ABCC13Q9NSE7 274 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 FANCLQ9NW38 375 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 TAB2Q9NYJ8 693 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 MARCH2Q9P0N8 246 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 RASAL2Q9UJF2 1139 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 KIF26AQ9ULI4 1882 aaPredicted RBP16.49■□□□□ 0.23
CCDC78-216ENST00000544996 F5P12259 2224 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 MIA3Q5JRA6 1907 aa16.49■□□□□ 0.23
CCDC78-216ENST00000544996 PATJQ8NI35 1801 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 PROB1E7EW31 1015 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 FBXO21O94952 628 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 EGFP01133 1207 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 NRLP54845 237 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 PTK2Q05397 1052 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 GAS6Q14393 721 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 ANO4Q32M45 955 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 BSPRYQ5W0U4 402 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 ALYREFQ86V81 257 aaKnown RBP16.48■□□□□ 0.23
CCDC78-216ENST00000544996 ATRIPQ8WXE1 791 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 IRGQQ8WZA9 623 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 NDRG1Q92597 394 aaKnown RBP16.48■□□□□ 0.23
CCDC78-216ENST00000544996 NKD2Q969F2 451 aaPredicted RBP16.48■□□□□ 0.23
CCDC78-216ENST00000544996 SEMA4AQ9H3S1 761 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 SIX2Q9NPC8 291 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 SPHK2Q9NRA0 654 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 TMEM63CQ9P1W3 806 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 ZNF510Q9Y2H8 683 aa16.48■□□□□ 0.23
CCDC78-216ENST00000544996 MYH10P35580 1976 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 YJEFN3A6XGL0 299 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 BECN2A8MW95 431 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.47■□□□□ 0.23
CCDC78-216ENST00000544996 E7ENQ6 273 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 PIK3R2O00459 728 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 SART1O43290 800 aaKnown RBP16.47■□□□□ 0.23
CCDC78-216ENST00000544996 STC2O76061 302 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 CDK11BP21127 795 aaKnown RBP16.47■□□□□ 0.23
CCDC78-216ENST00000544996 HOXD11P31277 338 aaPredicted RBP16.47■□□□□ 0.23
CCDC78-216ENST00000544996 OPRD1P41143 372 aa16.47■□□□□ 0.23
CCDC78-216ENST00000544996 EIF2DP41214 584 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms