RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 GRIK2Q13002 908 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 PLEKHG6Q3KR16 790 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 BTBD8Q5XKL5 378 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 DBX2Q6ZNG2 339 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 NUDT18Q6ZVK8 323 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 PAQR9Q6ZVX9 377 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 SV2BQ7L1I2 683 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 SCAMP5Q8TAC9 235 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 BAHD1Q8TBE0 780 aaPredicted RBP13.61□□□□□ -0.23
USP28-212ENST00000544750 DNASE2BQ8WZ79 361 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 FBXO32Q969P5 355 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 MRGPRX1Q96LB2 322 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 KCNK16Q96T55 309 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 SLC6A17Q9H1V8 727 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 TOR4AQ9NXH8 423 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 MARK1Q9P0L2 795 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 PCOLCE2Q9UKZ9 415 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 SH3BP1Q9Y3L3 701 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 NFE2L3Q9Y4A8 694 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 PCDHB9Q9Y5E1 797 aa13.61□□□□□ -0.23
USP28-212ENST00000544750 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
USP28-212ENST00000544750 STAU1O95793 577 aaKnown RBP13.6□□□□□ -0.23
USP28-212ENST00000544750 ZNF883P0CG24 379 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 MAOBP27338 520 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 PGFP49763 221 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 ANO4Q32M45 955 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 GRAMD4Q6IC98 578 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 HTR3DQ70Z44 454 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 BRAPQ7Z569 592 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 METTL3Q86U44 580 aaKnown RBP13.6□□□□□ -0.23
USP28-212ENST00000544750 RGL4Q8IZJ4 473 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 B3GALNT2Q8NCR0 500 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 GLIS3Q8NEA6 775 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 OR6B3Q8NGW1 331 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 NOC3LQ8WTT2 800 aaKnown RBP13.6□□□□□ -0.23
USP28-212ENST00000544750 FOXJ1Q92949 421 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 TRIM9Q9C026 710 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 ZDHHC5Q9C0B5 715 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 GZF1Q9H116 711 aaPredicted RBP13.6□□□□□ -0.23
USP28-212ENST00000544750 SNX25Q9H3E2 840 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 WSB2Q9NYS7 404 aaPredicted RBP13.6□□□□□ -0.23
USP28-212ENST00000544750 CCDC39Q9UFE4 941 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 FBXO2Q9UK22 296 aaPredicted RBP13.6□□□□□ -0.23
USP28-212ENST00000544750 MTMR6Q9Y217 621 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 APOBEC2Q9Y235 224 aaKnown RBP13.6□□□□□ -0.23
USP28-212ENST00000544750 R3HCC1Q9Y3T6 440 aaKnown RBP13.6□□□□□ -0.23
USP28-212ENST00000544750 RAD54BQ9Y620 910 aa13.6□□□□□ -0.23
USP28-212ENST00000544750 FLNBO75369 2602 aaKnown RBP13.59□□□□□ -0.23
USP28-212ENST00000544750 GFRA2O00451 464 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 CISD3P0C7P0 127 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 IDEP14735 1019 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 PDCP20941 246 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 SLC5A3P53794 718 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 BNC1Q01954 994 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 WDR45BQ5MNZ6 344 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 RRAGBQ5VZM2 374 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 TMPRSS7Q7RTY8 843 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 HSCBQ8IWL3 235 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 CHPFQ8IZ52 775 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 HNRNPLLQ8WVV9 542 aaKnown RBP13.59□□□□□ -0.23
USP28-212ENST00000544750 ERLEC1Q96DZ1 483 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 P2RY11Q96G91 374 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 KLF16Q9BXK1 252 aaPredicted RBP13.59□□□□□ -0.23
USP28-212ENST00000544750 XYLT2Q9H1B5 865 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 PANK4Q9NVE7 773 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 DNAJC17Q9NVM6 304 aaKnown RBP13.59□□□□□ -0.23
USP28-212ENST00000544750 COMMD8Q9NX08 183 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 HSPBP1Q9NZL4 362 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 FBXO10Q9UK96 956 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 RAXQ9Y2V3 346 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 SRPRBQ9Y5M8 271 aaKnown RBP13.59□□□□□ -0.23
USP28-212ENST00000544750 CLIC4Q9Y696 253 aa13.59□□□□□ -0.23
USP28-212ENST00000544750 ASH1LQ9NR48 2969 aaKnown RBP13.59□□□□□ -0.23
USP28-212ENST00000544750 A0A087X0B3 334 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 A0A1B0GTW7 788 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 A8MXQ7 604 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 WASH3PC4AMC7 463 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 NDUFS2O75306 463 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 TYRP14679 529 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 GNSP15586 552 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 CD6P30203 668 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 SYCP2LQ5T4T6 812 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 SDE2Q6IQ49 451 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 FAM35AQ86V20 835 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 ZMIZ2Q8NF64 920 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 C1orf216Q8TAB5 229 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 ZNF516Q92618 1163 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 CLIC6Q96NY7 704 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 CGRRF1Q99675 332 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 IL21RQ9HBE5 538 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 KIAA1586Q9HCI6 787 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 CACNA2D2Q9NY47 1150 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 GMIPQ9P107 970 aa13.58□□□□□ -0.24
USP28-212ENST00000544750 USP36Q9P275 1121 aaKnown RBP13.58□□□□□ -0.24
USP28-212ENST00000544750 MYLKQ15746 1914 aa13.57□□□□□ -0.24
USP28-212ENST00000544750 KCNJ18B7U540 433 aa13.57□□□□□ -0.24
USP28-212ENST00000544750 NEDD8-MDP1E9PL57 170 aa13.57□□□□□ -0.24
USP28-212ENST00000544750 ZBTB24O43167 697 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms