RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 PFKLP17858 780 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 KCNA5P22460 613 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 RRM1P23921 792 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 TUBP50607 506 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 GALCP54803 685 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 YWHAGP61981 247 aaKnown RBP eCLIP13.72□□□□□ -0.21
DDX11-227ENST00000544652 SMAD4Q13485 552 aaKnown RBP13.72□□□□□ -0.21
DDX11-227ENST00000544652 LEXMQ3ZCV2 418 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 OR6B2Q6IFH4 312 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 PLEKHA7Q6IQ23 1121 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 HFE2Q6ZVN8 426 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 SHKBP1Q8TBC3 707 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 NECTIN4Q96NY8 510 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 TRPM5Q9NZQ8 1165 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 ZMYM5Q9UJ78 669 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 CDH22Q9UJ99 828 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 TMEM59LQ9UK28 342 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 REXO2Q9Y3B8 237 aaKnown RBP13.72□□□□□ -0.21
DDX11-227ENST00000544652 DOCK4Q8N1I0 1966 aa13.72□□□□□ -0.21
DDX11-227ENST00000544652 A0A1W2PQH9 124 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 A0A1W2PRU2 124 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 FAM170AA1A519 330 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 SIGLEC16A6NMB1 481 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 H3BQ06 376 aaPredicted RBP13.71□□□□□ -0.21
DDX11-227ENST00000544652 HSF2BPO75031 334 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 OAS1P00973 400 aaKnown RBP13.71□□□□□ -0.21
DDX11-227ENST00000544652 H2AFZP0C0S5 128 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 TMEM253P0C7T8 217 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 DDX6P26196 483 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDX11-227ENST00000544652 YWHAZP63104 245 aaKnown RBP13.71□□□□□ -0.21
DDX11-227ENST00000544652 GPC5P78333 572 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
DDX11-227ENST00000544652 BSPRYQ5W0U4 402 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 H2AFVQ71UI9 128 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 ZNF653Q96CK0 615 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 TCEAL4Q96EI5 215 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 SLC2A13Q96QE2 648 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 TRIM62Q9BVG3 475 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 PACSIN1Q9BY11 444 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 THAP2Q9H0W7 228 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 KCNF1Q9H3M0 494 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 ATXN3LQ9H3M9 355 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 POPDC2Q9HBU9 364 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 ABCC13Q9NSE7 274 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDX11-227ENST00000544652 CNOT8Q9UFF9 292 aaKnown RBP13.71□□□□□ -0.21
DDX11-227ENST00000544652 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 USP15Q9Y4E8 981 aaPredicted RBP13.71□□□□□ -0.21
DDX11-227ENST00000544652 PCDHA13Q9Y5I0 950 aa13.71□□□□□ -0.21
DDX11-227ENST00000544652 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.22
DDX11-227ENST00000544652 C2orf72A6NCS6 295 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 NRDCO43847 1150 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 DAB1O75553 588 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 CYP1A2P05177 515 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 PTMAP06454 111 aaKnown RBP13.7□□□□□ -0.22
DDX11-227ENST00000544652 GJA1P17302 382 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 FSHRP23945 695 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 WEE1P30291 646 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 MAGEA1P43355 309 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 CYP4F8P98187 520 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 MAMLD1Q13495 774 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 CBX2Q14781 532 aaPredicted RBP13.7□□□□□ -0.22
DDX11-227ENST00000544652 TCEAL1Q15170 157 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 SPA17Q15506 151 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 TAF5Q15542 800 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 TEAD2Q15562 447 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 CLUL1Q15846 466 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 FAM102AQ5T9C2 384 aaPredicted RBP13.7□□□□□ -0.22
DDX11-227ENST00000544652 BTBD8Q5XKL5 378 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 MSANTD2Q6P1R3 559 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 KLHDC10Q6PID8 442 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 POTEHQ6S545 545 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.7□□□□□ -0.22
DDX11-227ENST00000544652 ITFG1Q8TB96 612 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 MRPS31Q92665 395 aaKnown RBP13.7□□□□□ -0.22
DDX11-227ENST00000544652 GCNAQ96QF7 691 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 POMKQ9H5K3 350 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 METTL5Q9NRN9 209 aaKnown RBP13.7□□□□□ -0.22
DDX11-227ENST00000544652 PARVAQ9NVD7 372 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 MRPS23Q9Y3D9 190 aaKnown RBP13.7□□□□□ -0.22
DDX11-227ENST00000544652 MIA3Q5JRA6 1907 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 MYO10Q9HD67 2058 aa13.7□□□□□ -0.22
DDX11-227ENST00000544652 C2orf78A6NCI8 922 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 GOLGA8SH3BPF8 625 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 PJA2O43164 708 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 IPO7O95373 1038 aaKnown RBP13.69□□□□□ -0.22
DDX11-227ENST00000544652 RALAP11233 206 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 KRT3P12035 628 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 RARGP13631 454 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 CEBPBP17676 345 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 ABCB4P21439 1286 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 NOS2P35228 1153 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 KRT83P78385 493 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 PUS10Q3MIT2 529 aaKnown RBP13.69□□□□□ -0.22
DDX11-227ENST00000544652 HECTD3Q5T447 861 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 TXNDC8Q6A555 127 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 TRNP1Q6NT89 227 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 DNAJC24Q6P3W2 148 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 NPAS3Q8IXF0 933 aa13.69□□□□□ -0.22
DDX11-227ENST00000544652 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms