RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 NCAM1P13591 858 aa31.77■■■□□ 2.68
CCM2-219ENST00000544363 MFSD7Q6UXD7 560 aa31.77■■■□□ 2.68
CCM2-219ENST00000544363 OSBPL8Q9BZF1 889 aa31.77■■■□□ 2.68
CCM2-219ENST00000544363 ZBP1Q9H171 429 aa31.77■■■□□ 2.68
CCM2-219ENST00000544363 SCML2Q9UQR0 700 aa31.77■■■□□ 2.68
CCM2-219ENST00000544363 NR2E1Q9Y466 385 aa31.77■■■□□ 2.68
CCM2-219ENST00000544363 LRRD1A4D1F6 860 aa31.76■■■□□ 2.67
CCM2-219ENST00000544363 RALAP11233 206 aa31.76■■■□□ 2.67
CCM2-219ENST00000544363 OTUD1Q5VV17 481 aaPredicted RBP31.76■■■□□ 2.67
CCM2-219ENST00000544363 SPOCD1Q6ZMY3 1216 aa31.76■■■□□ 2.67
CCM2-219ENST00000544363 DENND5BQ6ZUT9 1274 aa31.76■■■□□ 2.67
CCM2-219ENST00000544363 TEKT4Q8WW24 435 aa31.76■■■□□ 2.67
CCM2-219ENST00000544363 AUTS2Q8WXX7 1259 aa31.76■■■□□ 2.67
CCM2-219ENST00000544363 HSPH1Q92598 858 aa31.76■■■□□ 2.67
CCM2-219ENST00000544363 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP31.76■■■□□ 2.67
CCM2-219ENST00000544363 CALCOCO1Q9P1Z2 691 aa31.76■■■□□ 2.67
CCM2-219ENST00000544363 HSFX1Q9UBD0 423 aa31.76■■■□□ 2.67
CCM2-219ENST00000544363 GOLGA6L10A0A0M3HER8 536 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 TCRBV7S2A1N4TA0A589 114 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 RTN3O95197 1032 aaPredicted RBP31.75■■■□□ 2.67
CCM2-219ENST00000544363 KDELR1P24390 212 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 DNAJB2P25686 324 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 PTPN7P35236 360 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 TUFMP49411 452 aaKnown RBP31.75■■■□□ 2.67
CCM2-219ENST00000544363 ATXN1P54253 815 aaKnown RBP31.75■■■□□ 2.67
CCM2-219ENST00000544363 YWHAGP61981 247 aaKnown RBP eCLIP31.75■■■□□ 2.67
CCM2-219ENST00000544363 PITX1P78337 314 aaPredicted RBP31.75■■■□□ 2.67
CCM2-219ENST00000544363 RAB33AQ14088 237 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 LLGL1Q15334 1064 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 COL13A1Q5TAT6 717 aaPredicted RBP31.75■■■□□ 2.67
CCM2-219ENST00000544363 ANKS1BQ7Z6G8 1248 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 GPR161Q8N6U8 529 aaKnown RBP31.75■■■□□ 2.67
CCM2-219ENST00000544363 STKLD1Q8NE28 680 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 MAIP1Q8WWC4 291 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 COMMD8Q9NX08 183 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 FNIP2Q9P278 1114 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 MTUS1Q9ULD2 1270 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 SSX2IPQ9Y2D8 614 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 CCDC85CA6NKD9 419 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 C3orf70A6NLC5 250 aaPredicted RBP31.75■■■□□ 2.67
CCM2-219ENST00000544363 M0QYT0 321 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 LILRB3O75022 631 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 CTSAP10619 480 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 BMPR1AP36894 532 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 CREMQ03060 361 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 ZDHHC14Q8IZN3 488 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 EDEM1Q92611 657 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 KRT12Q99456 494 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 HERPUD2Q9BSE4 406 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 NR2E3Q9Y5X4 410 aa31.75■■■□□ 2.67
CCM2-219ENST00000544363 COL4A4P53420 1690 aaPredicted RBP31.74■■■□□ 2.67
CCM2-219ENST00000544363 DYNC1I1O14576 645 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 RHOXF2BP0C7M4 288 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 ATF2P15336 505 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 USP46P62068 366 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 TFDP3Q5H9I0 405 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 KCTD6Q8NC69 237 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 SLC7A14Q8TBB6 771 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 GPR152Q8TDT2 470 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 CEP295NLQ96MC4 621 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 RHOXF2Q9BQY4 288 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 HEMGNQ9BXL5 484 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 EPC1Q9H2F5 836 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 RXFP1Q9HBX9 757 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 ABCC13Q9NSE7 274 aa31.74■■■□□ 2.67
CCM2-219ENST00000544363 FAM92AA1XBS5 289 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 MDM4O15151 490 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 RDXP35241 583 aaKnown RBP31.73■■■□□ 2.67
CCM2-219ENST00000544363 CDKN2BP42772 138 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 SIX1Q15475 284 aaPredicted RBP31.73■■■□□ 2.67
CCM2-219ENST00000544363 PPP2R5EQ16537 467 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 C9orf50Q5SZB4 431 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 BTBD8Q5XKL5 378 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 CCDC70Q6NSX1 233 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 SCD5Q86SK9 330 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 MON1AQ86VX9 555 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 KLHL7Q8IXQ5 586 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 PGAP3Q96FM1 320 aaPredicted RBP31.73■■■□□ 2.67
CCM2-219ENST00000544363 SNRNP25Q9BV90 132 aaKnown RBP31.73■■■□□ 2.67
CCM2-219ENST00000544363 STAU2Q9NUL3 570 aaKnown RBP eCLIP31.73■■■□□ 2.67
CCM2-219ENST00000544363 RWDD3Q9Y3V2 267 aa31.73■■■□□ 2.67
CCM2-219ENST00000544363 YWHAQP27348 245 aa31.72■■■□□ 2.67
CCM2-219ENST00000544363 CTNNB1P35222 781 aa31.72■■■□□ 2.67
CCM2-219ENST00000544363 DEUP1Q05D60 604 aa31.72■■■□□ 2.67
CCM2-219ENST00000544363 KLF1Q13351 362 aaPredicted RBP31.72■■■□□ 2.67
CCM2-219ENST00000544363 ERMARDQ5T6L9 678 aa31.72■■■□□ 2.67
CCM2-219ENST00000544363 PRELID2Q8N945 189 aa31.72■■■□□ 2.67
CCM2-219ENST00000544363 LRRC1Q9BTT6 524 aa31.72■■■□□ 2.67
CCM2-219ENST00000544363 ANKZF1Q9H8Y5 726 aa31.72■■■□□ 2.67
CCM2-219ENST00000544363 hCG_1818297A0A087WSY0 165 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 LINC01553A4QN01 128 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 SEC24AO95486 1093 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 ATF6P18850 670 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 MAGEA10P43363 369 aaPredicted RBP31.71■■■□□ 2.67
CCM2-219ENST00000544363 ARSEP51690 589 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 TAZQ16635 292 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 GLE1Q53GS7 698 aaKnown RBP31.71■■■□□ 2.67
CCM2-219ENST00000544363 ARHGAP18Q8N392 663 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 DDX47Q9H0S4 455 aaKnown RBP31.71■■■□□ 2.67
CCM2-219ENST00000544363 LZTS1Q9Y250 596 aa31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms