RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 NAB2Q15742 525 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 MAPK11Q15759 364 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 QRICH1Q2TAL8 776 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 HLA-DQA1Q5Y7H0 255 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 ZNF677Q86XU0 584 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 SYTL1Q8IYJ3 562 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 ZNF671Q8TAW3 534 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 UCMAQ8WVF2 138 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 GPRASP2Q96D09 838 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 OTUD5Q96G74 571 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 MCM8Q9UJA3 840 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 SIK3Q9Y2K2 1263 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 CLTCL1P53675 1640 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 LMTK2Q8IWU2 1503 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 A0A1W2PRG6 482 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 SLCO1B7G3V0H7 640 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 RPS6KA5O75582 802 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 AP1S2P56377 157 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 CRYMQ14894 314 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 UBA3Q8TBC4 463 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 MPP4Q96JB8 637 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 CPVLQ9H3G5 476 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 RBM12Q9NTZ6 932 aaKnown RBP10.71□□□□□ -0.7
PCDH9-204ENST00000544246 SRP68Q9UHB9 627 aaKnown RBP10.71□□□□□ -0.7
PCDH9-204ENST00000544246 CDC40O60508 579 aaKnown RBP eCLIP10.7□□□□□ -0.7
PCDH9-204ENST00000544246 RGS20O76081 388 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 SASH1O94885 1247 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 COILP38432 576 aaPredicted RBP10.7□□□□□ -0.7
PCDH9-204ENST00000544246 IFNGR2P38484 337 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 TMEM132BQ14DG7 1078 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 NECTIN1Q15223 517 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 SMTNL2Q2TAL5 461 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 PDPK2PQ6A1A2 396 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 ZIM3Q96PE6 472 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 WDR24Q96S15 920 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 HAO1Q9UJM8 370 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 RWDD3Q9Y3V2 267 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 CHURC1-FNTBB4DL54 471 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 TIMM44O43615 452 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 PMPCBO75439 489 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 COMTP21964 271 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 CALB2P22676 271 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 HALP42357 657 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 OR1G1P47890 313 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 ARHGDIBP52566 201 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 DNAJC3Q13217 504 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 SNRNP35Q16560 246 aaKnown RBP10.7□□□□□ -0.7
PCDH9-204ENST00000544246 CYB5D1Q6P9G0 228 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 TDRD5Q8NAT2 981 aaKnown RBP10.7□□□□□ -0.7
PCDH9-204ENST00000544246 SLC20A1Q8WUM9 679 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 OSCP1Q8WVF1 389 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 FIG4Q92562 907 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 KCNB2Q92953 911 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 ATAD3AQ9NVI7 634 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 N6AMT1Q9Y5N5 214 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 PREX1Q8TCU6 1659 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 PPRC1Q5VV67 1664 aaKnown RBP10.7□□□□□ -0.7
PCDH9-204ENST00000544246 C21orf2O43822 256 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 MGRN1O60291 552 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 DGAT1O75907 488 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 SCARA3Q6AZY7 606 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 CCNJLQ8IV13 435 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 SETD9Q8NE22 299 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 TMEM143Q96AN5 459 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 MTFR1LQ9H019 292 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 CLPBQ9H078 707 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 TDRD3Q9H7E2 651 aaKnown RBP10.7□□□□□ -0.7
PCDH9-204ENST00000544246 AHSPQ9NZD4 102 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 TPRKBQ9Y3C4 175 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 F5H5T6 163 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 EXTL3O43909 919 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 STX11O75558 287 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 ITGALP20701 1170 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 CCNG1P51959 295 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 SPANXN2Q5MJ10 180 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 RACGAP1Q9H0H5 632 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 SSU72P8A0A1W2PR75 194 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 CCDC189A1A4V9 331 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 NMT2O60551 498 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 STAU1O95793 577 aaKnown RBP10.7□□□□□ -0.7
PCDH9-204ENST00000544246 FASP25445 335 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 EPS8Q12929 822 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 MAD2L1Q13257 205 aaPredicted RBP10.7□□□□□ -0.7
PCDH9-204ENST00000544246 TOB2Q14106 344 aaPredicted RBP10.7□□□□□ -0.7
PCDH9-204ENST00000544246 XKR3Q5GH77 459 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 KCNT1Q5JUK3 1230 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 IZUMO2Q6UXV1 221 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 FEZF2Q8TBJ5 459 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 OXCT2Q9BYC2 517 aaPredicted RBP10.7□□□□□ -0.7
PCDH9-204ENST00000544246 NEK6Q9HC98 313 aa10.7□□□□□ -0.7
PCDH9-204ENST00000544246 PDS5AQ29RF7 1337 aaKnown RBP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TULP4Q9NRJ4 1543 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 UBE2QL1A1L167 161 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 BCLAF3A2AJT9 711 aaKnown RBP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TRIM66O15016 1216 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 SLC26A4O43511 780 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 FKBP6O75344 327 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TNFRSF21O75509 655 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 OR6B1O95007 311 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms