RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TIAL1Q01085 375 aaKnown RBP eCLIP4.26□□□□□ -1.732e-6■■■□□ 18.2
SCFD1-207ENST00000544052 BEAN1Q3B7T3 259 aa4.26□□□□□ -1.73
SCFD1-207ENST00000544052 ADCK5Q3MIX3 580 aa4.26□□□□□ -1.73
SCFD1-207ENST00000544052 ATPAF1Q5TC12 328 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-207ENST00000544052 IZUMO1Q8IYV9 350 aa4.26□□□□□ -1.73
SCFD1-207ENST00000544052 NAXEQ8NCW5 288 aa4.26□□□□□ -1.73
SCFD1-207ENST00000544052 MBD3L2Q8NHZ7 208 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-207ENST00000544052 SUN3Q8TAQ9 357 aa4.26□□□□□ -1.73
SCFD1-207ENST00000544052 THAP4Q8WY91 577 aa4.26□□□□□ -1.73
SCFD1-207ENST00000544052 WDR24Q96S15 920 aa4.26□□□□□ -1.73
SCFD1-207ENST00000544052 ELAC1Q9H777 363 aaKnown RBP4.26□□□□□ -1.73
SCFD1-207ENST00000544052 SEPSECSQ9HD40 501 aaKnown RBP4.26□□□□□ -1.73
SCFD1-207ENST00000544052 MAP3K20Q9NYL2 800 aaKnown RBP4.26□□□□□ -1.73
SCFD1-207ENST00000544052 RIMKLBQ9ULI2 386 aa4.26□□□□□ -1.73
SCFD1-207ENST00000544052 USP22Q9UPT9 525 aa4.26□□□□□ -1.73
SCFD1-207ENST00000544052 KIF21BO75037 1637 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 FAM90A18PA6NE21 464 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 FAM90A16PA6NEW6 464 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 FAM90A9PA6NNJ1 464 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 FAM90A5PA8MXJ8 464 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 J3KRW8 73 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 EXOC5O00471 708 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 EPB41L2O43491 1005 aaKnown RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 SNX2O60749 519 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 RHOBTB3O94955 611 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 RHOP08100 348 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 FAM90A15PP0C7V4 464 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 FAM90A14PP0C7W9 464 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 RBL1P28749 1068 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 POLE2P56282 527 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 SPDYE7PQ495Y7 208 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 INTS11Q5TA45 600 aaKnown RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 MSANTD2Q6P1R3 559 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 MAATS1Q7Z4T9 603 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 CPEB3Q8NE35 698 aaKnown RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 HERVK_113Q902F9 699 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 C3orf49Q96BT1 292 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 ZDHHC12Q96GR4 267 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 BOD1Q96IK1 185 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 MAELQ96JY0 434 aaKnown RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 ZNF668Q96K58 619 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 COG8Q96MW5 612 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 INO80BQ9C086 356 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 INTS13Q9NVM9 706 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 KCND3Q9UK17 655 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 DRG1Q9Y295 367 aaKnown RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 LRRIQ1Q96JM4 1722 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 SIGLEC1Q9BZZ2 1709 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 WDR7Q9Y4E6 1490 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 FRMPD1Q5SYB0 1578 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 TRGV11A0A075B6L2 103 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 A0A0G2JLL6 359 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 RNASET2O00584 256 aaKnown RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 FOXD2O60548 495 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 CDKL5O76039 1030 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 ITGB3P05106 788 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 EPHA3P29320 983 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 PBX1P40424 430 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 DDX10Q13206 875 aaKnown RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 RPS6KA2Q15349 733 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 MAPRE1Q15691 268 aaKnown RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 P3H1Q32P28 736 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 TMEM196Q5HYL7 178 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 SP5Q6BEB4 398 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 NFRKBQ6P4R8 1299 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 PIK3AP1Q6ZUJ8 805 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 MAVSQ7Z434 540 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 OR6Y1Q8NGX8 325 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 LPIN2Q92539 896 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 GOLGA1Q92805 767 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 GLG1Q92896 1179 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 PPM1MQ96MI6 270 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 MECRQ9BV79 373 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 VN1R3Q9BXE9 311 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 DEF6Q9H4E7 631 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 GALNT9Q9HCQ5 603 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 CNTN6Q9UQ52 1028 aa4.25□□□□□ -1.73
SCFD1-207ENST00000544052 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.25□□□□□ -1.73
SCFD1-207ENST00000544052 PLSCR1O15162 318 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 LPXNO60711 386 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 PRKCBP05771 671 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 CYP21A2P08686 494 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 PEPDP12955 493 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 DDX6P26196 483 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCFD1-207ENST00000544052 MAGEA10P43363 369 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-207ENST00000544052 AARSP49588 968 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCFD1-207ENST00000544052 CLCN2P51788 898 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 GEMIN4P57678 1058 aaKnown RBP4.24□□□□□ -1.73
SCFD1-207ENST00000544052 SLC25A3Q00325 362 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 TBX2Q13207 712 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-207ENST00000544052 NFIXQ14938 502 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 TRIM60Q495X7 471 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 TTC22Q5TAA0 569 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 WDR78Q5VTH9 848 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 CLEC4GQ6UXB4 293 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 SYT13Q7L8C5 426 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 CAND1Q86VP6 1230 aaKnown RBP4.24□□□□□ -1.73
SCFD1-207ENST00000544052 COLGALT2Q8IYK4 626 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 SUPT20HQ8NEM7 779 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 PPHLN1Q8NEY8 458 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms