RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 APOEP02649 317 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 GPD1P21695 349 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 CRHR1P34998 444 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 PSMC4P43686 418 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 TMPRSS15P98073 1019 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 TFAMQ00059 246 aaKnown RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 PTPN11Q06124 597 aaPredicted RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 THOC5Q13769 683 aaKnown RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 SCARA3Q6AZY7 606 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 AAGABQ6PD74 315 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 CYS1Q717R9 158 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 ZBTB33Q86T24 672 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 SESTD1Q86VW0 696 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 SCUBE1Q8IWY4 988 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 PPM1NQ8N819 430 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 HSPH1Q92598 858 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 FAM161BQ96MY7 647 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 RNF157Q96PX1 679 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 FAM96AQ9H5X1 160 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 ZC3H7BQ9UGR2 993 aaKnown RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 ZSWIM8A7E2V4 1837 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 FAM237BA0A1B0GVD1 139 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 SPDYE5A6NIY4 337 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 FAM159BA6NKW6 160 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 H7C0C1 242 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 DPYSL4O14531 572 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 RFPL1O75677 317 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 SERPINA6P08185 405 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 TPSB2P20231 275 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 ATICP31939 592 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 MAGEA3P43357 314 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 ATP5OP48047 213 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 TUBP50607 506 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 CDH6P55285 790 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 ACTR3P61158 418 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 AP2B1P63010 937 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 MRPS5P82675 430 aaKnown RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 TPSAB1Q15661 275 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 TMCO4Q5TGY1 634 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 CYP4V2Q6ZWL3 525 aaPredicted RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 ALYREFQ86V81 257 aaKnown RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 ZC3H18Q86VM9 953 aaKnown RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 GPC2Q8N158 579 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 GALNT15Q8N3T1 639 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 TTC39CQ8N584 583 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 EMC1Q8N766 993 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 CHST13Q8NET6 341 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 PRPF31Q8WWY3 499 aaKnown RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 CFAP36Q96G28 342 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 TBCBQ99426 244 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 PCYT2Q99447 389 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 ADPGKQ9BRR6 497 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 RAB6BQ9NRW1 208 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 KRT82Q9NSB4 513 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 TJP2Q9UDY2 1190 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 PCSK1NQ9UHG2 260 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 ZNF112Q9UJU3 913 aa14.25□□□□□ -0.13
VPS33A-208ENST00000543633 HBS1LQ9Y450 684 aaKnown RBP14.25□□□□□ -0.13
VPS33A-208ENST00000543633 MGAMO43451 1857 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 E5RJQ4 531 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 MICAL2O94851 1124 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 BPGMP07738 259 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 VDRP11473 427 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 AOC1P19801 751 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 PAPOLAP51003 745 aaKnown RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 RBBP5Q15291 538 aaKnown RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 CDHR3Q6ZTQ4 885 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 PRPF39Q86UA1 669 aaKnown RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 NUDCD3Q8IVD9 361 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 CTAGE3PQ8IX95 158 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 RBM15BQ8NDT2 890 aaKnown RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 SPDYE1Q8NFV5 336 aaPredicted RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 GSDMBQ8TAX9 411 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 ACMSDQ8TDX5 336 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 PEBP4Q96S96 227 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 CCDC106Q9BWC9 280 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 GCOM2Q9BZD3 368 aaPredicted RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 PTPRHQ9HD43 1115 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 PAPOLBQ9NRJ5 636 aaKnown RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 GPRC5DQ9NZD1 345 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 PPARGC1AQ9UBK2 798 aaKnown RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 C2CD4BA6NLJ0 364 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 TTLL13PA6NNM8 815 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 H3BRJ5 948 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 PRPSAP2O60256 369 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 CILPO75339 1184 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 PIAS1O75925 651 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 FARP2O94887 1054 aaPredicted RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 P4HA1P13674 534 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 ANPEPP15144 967 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 UBA1P22314 1058 aaKnown RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 GCLCP48506 637 aaPredicted RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 STAT5BP51692 787 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 CHI3L2Q15782 390 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 BOLA3Q53S33 107 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 CWF19L1Q69YN2 538 aaKnown RBP14.24□□□□□ -0.13
VPS33A-208ENST00000543633 SLC9A4Q6AI14 798 aa14.24□□□□□ -0.13
VPS33A-208ENST00000543633 CAND1Q86VP6 1230 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms