RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 NCANO14594 1321 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 SYNJ2BP-COX16A0A087WUM0 186 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 SLC12A8A0AV02 714 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 FAM92AA1XBS5 289 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 ANKRD62A6NC57 917 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 YJEFN3A6XGL0 299 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 HEPACAM2A8MVW5 462 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 E7ENQ6 273 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 NRG2O14511 850 aaPredicted RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 ZNF263O14978 683 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 MDM4O15151 490 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 PAPSS1O43252 624 aaPredicted RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 COCHO43405 550 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 HSF2BPO75031 334 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 RTN2O75298 545 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 PRAMEF12O95522 483 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 TBX18O95935 607 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 ERBB2P04626 1255 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 CYP1A1P04798 512 aaPredicted RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 ASGR2P07307 311 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 PLEKP08567 350 aaPredicted RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 ZDHHC11BP0C7U3 371 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 UNGP13051 313 aaPredicted RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 DESP17661 470 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 PFKLP17858 780 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 CDC25BP30305 580 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 GDI1P31150 447 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 CDH5P33151 784 aaPredicted RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 EIF4A3P38919 411 aaKnown RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 PRKCIP41743 596 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 IFNAR2P48551 515 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 MRE11P49959 708 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 TUBP50607 506 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 YWHAZP63104 245 aaKnown RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 SLC6A3Q01959 620 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 CENPCQ03188 943 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 TBX2Q13207 712 aaPredicted RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 TDGQ13569 410 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 GRM2Q14416 872 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 PTPN20Q4JDL3 420 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 CCDC122Q5T0U0 273 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 SNX30Q5VWJ9 437 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 E4F1Q66K89 784 aaPredicted RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 PM20D1Q6GTS8 502 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 TANGO2Q6ICL3 276 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 ACAD10Q6JQN1 1059 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 DNAJC24Q6P3W2 148 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 HFE2Q6ZVN8 426 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 SCD5Q86SK9 330 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 TMEM110Q86TL2 294 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 RNF135Q8IUD6 432 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 SCML4Q8N228 414 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 BPIFB1Q8TDL5 484 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 CSGALNACT1Q8TDX6 532 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 SH3RF2Q8TEC5 729 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 DEPDC1BQ8WUY9 529 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 RSAD2Q8WXG1 361 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 FGF14Q92915 247 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 RNF34Q969K3 372 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 NXPE3Q969Y0 559 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 ELSPBP1Q96BH3 223 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 TRIM11Q96F44 468 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 SLC22A12Q96S37 553 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 PCDHB18PQ96TA0 734 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 DNAJC7Q99615 494 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 TRMT61BQ9BVS5 477 aaKnown RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 RNF38Q9H0F5 515 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 BRD9Q9H8M2 597 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 FAM204AQ9H8W3 233 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 KCNK12Q9HB15 430 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 POPDC2Q9HBU9 364 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 METTL5Q9NRN9 209 aaKnown RBP6.61□□□□□ -1.35
LTBR-212ENST00000543542 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.61□□□□□ -1.35
LTBR-212ENST00000543542 CLIC5Q9NZA1 410 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 MARCH2Q9P0N8 246 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 COX16Q9P0S2 106 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 WDR35Q9P2L0 1181 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 IMPACTQ9P2X3 320 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 MYO1AQ9UBC5 1043 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 TJP2Q9UDY2 1190 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 ADAMTS1Q9UHI8 967 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 SFMBT1Q9UHJ3 866 aa6.61□□□□□ -1.35
LTBR-212ENST00000543542 LEFTY2O00292 366 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 STK25O00506 426 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 DDX3XO00571 662 aaKnown RBP eCLIP6.6□□□□□ -1.35
LTBR-212ENST00000543542 NRDCO43847 1150 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 ECI2O75521 394 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 IPO7O95373 1038 aaKnown RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 SLC34A2O95436 690 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 OAS1P00973 400 aaKnown RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 FTLP02792 175 aaPredicted RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 PTMAP06454 111 aaKnown RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 GLI1P08151 1106 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 KRT3P12035 628 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 PSMC3P17980 439 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 ABCB4P21439 1286 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 MMP8P22894 467 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 GBP1P32455 592 aa6.6□□□□□ -1.35
LTBR-212ENST00000543542 CYLC1P35663 651 aaPredicted RBP6.6□□□□□ -1.35
LTBR-212ENST00000543542 GABRB2P47870 512 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms