RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ABLIM1O14639 778 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 SUPT7LO94864 414 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 FAM86B2P0C5J1 330 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 CCL15Q16663 113 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 STRA8Q7Z7C7 330 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 CLVS1Q8IUQ0 354 aaPredicted RBP19.97■□□□□ 0.79
SUDS3-204ENST00000543473 TERB1Q8NA31 727 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 HPDLQ96IR7 371 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 PWWP2AQ96N64 755 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 CNPY3Q9BT09 278 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 NEUROG2Q9H2A3 272 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 RUVBL2Q9Y230 463 aaKnown RBP19.97■□□□□ 0.79
SUDS3-204ENST00000543473 FMN2Q9NZ56 1722 aa19.97■□□□□ 0.79
SUDS3-204ENST00000543473 ABHD2P08910 425 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 CCNHP51946 323 aaPredicted RBP19.96■□□□□ 0.79
SUDS3-204ENST00000543473 CCDC81Q6ZN84 652 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 SPIRE2Q8WWL2 714 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 ACP6Q9NPH0 428 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 CISHQ9NSE2 258 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 NMRK1Q9NWW6 199 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 PIK3C2AO00443 1686 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 NFIBO00712 420 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 C2CD2LO14523 706 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 SMNDC1O75940 238 aaKnown RBP eCLIP19.96■□□□□ 0.794e-7■■■□□ 17.2
SUDS3-204ENST00000543473 LCA5LO95447 670 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 BACE1P56817 501 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 KATNAL2Q8IYT4 538 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 THEM5Q8N1Q8 247 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 RASGEF1CQ8N431 466 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 MYO1GB0I1T2 1018 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 EDF1O60869 148 aaKnown RBP19.96■□□□□ 0.79
SUDS3-204ENST00000543473 PGM3O95394 542 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 SLC25A27O95847 323 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 CHN2P52757 468 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 ATP1A4Q13733 1029 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 CHST13Q8NET6 341 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 RMDN1Q96DB5 314 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 SLC13A4Q9UKG4 626 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 ANPEPP15144 967 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 VCAM1P19320 739 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 TPP2P29144 1249 aaPredicted RBP19.96■□□□□ 0.79
SUDS3-204ENST00000543473 CCDC15Q0P6D6 951 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 LRP10Q7Z4F1 713 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 CDRT15Q96T59 188 aa19.96■□□□□ 0.79
SUDS3-204ENST00000543473 ME2P23368 584 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 AVPR1AP37288 418 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 KCTD21Q4G0X4 260 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 FAM83AQ86UY5 434 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 CASP10Q92851 521 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 NR1H4Q96RI1 486 aaPredicted RBP19.95■□□□□ 0.78
SUDS3-204ENST00000543473 CGRRF1Q99675 332 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 MYRFQ9Y2G1 1151 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 BNIP3LO60238 219 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 WDR47O94967 919 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 ACADSBP45954 432 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 HUNKP57058 714 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 MGAT5Q09328 741 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 BTBD8Q5XKL5 378 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 TAS2R42Q7RTR8 314 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 OR6J1Q8NGC5 347 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 SPON2Q9BUD6 331 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 MON2Q7Z3U7 1717 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 ITGB3P05106 788 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 MAPTP10636 758 aaKnown RBP19.95■□□□□ 0.78
SUDS3-204ENST00000543473 FECHP22830 423 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 NCKAP1LP55160 1127 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 PPP3CAQ08209 521 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 ZNF235Q14590 738 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 MFSD14CQ5VZR4 134 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 RIPOR1Q6ZS17 1223 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 FITM2Q8N6M3 262 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 STKLD1Q8NE28 680 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 TUBGCP3Q96CW5 907 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 MMTAG2Q9BU76 263 aaKnown RBP19.95■□□□□ 0.78
SUDS3-204ENST00000543473 GRIN2DO15399 1336 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 ANKRD26Q9UPS8 1709 aa19.95■□□□□ 0.78
SUDS3-204ENST00000543473 SMIM31A0A1B0GVY4 71 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 SAC3D1A6NKF1 404 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 WNT10BO00744 389 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 OGTO15294 1046 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 DYNC1LI2O43237 492 aaPredicted RBP19.94■□□□□ 0.78
SUDS3-204ENST00000543473 SLC25A3Q00325 362 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 TSPY1Q01534 308 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 BLMHQ13867 455 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 PCSK7Q16549 785 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 WDR60Q8WVS4 1066 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 TNFRSF25Q93038 417 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 FAM162AQ96A26 154 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 AKT1S1Q96B36 256 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 PARK7Q99497 189 aaKnown RBP19.94■□□□□ 0.78
SUDS3-204ENST00000543473 GORASP1Q9BQQ3 440 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 TMEM247A6NEH6 219 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 P3H2Q8IVL5 708 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 GMCL1P1Q8NEA9 526 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 FAM81AQ8TBF8 368 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 FAM172AQ8WUF8 416 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 BRD8Q9H0E9 1235 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 KCTD10Q9H3F6 313 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 ERVK-5Q9HDB9 667 aa19.94■□□□□ 0.78
SUDS3-204ENST00000543473 ADARB2Q9NS39 739 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms