RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 GABRB2P47870 512 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 ARID5BQ14865 1188 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 CLEC16AQ2KHT3 1053 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 HGSNATQ68CP4 663 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 VITQ6UXI7 678 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 HFE2Q6ZVN8 426 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 ZNF571Q7Z3V5 609 aaPredicted RBP17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 MFSD6LQ8IWD5 586 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 OR8K1Q8NGG5 319 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 OLIG1Q8TAK6 271 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 DEPDC1BQ8WUY9 529 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 C18orf8Q96DM3 657 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 LRRC3BQ96PB8 259 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 NACA2Q9H009 215 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 ABCC13Q9NSE7 274 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 SEPT11Q9NVA2 429 aaKnown RBP17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 CPQQ9Y646 472 aa17.94■□□□□ 0.46
RABGGTA-203ENST00000543002 TTC28Q96AY4 2481 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 TBX18O95935 607 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 SERPING1P05155 500 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 PSMC3P17980 439 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 CENPCQ03188 943 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 C10orf120Q5SQS8 335 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 OR6B2Q6IFH4 312 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 ZDHHC17Q8IUH5 632 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 BPIFB1Q8TDL5 484 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 GOLGA1Q92805 767 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 DNAJC7Q99615 494 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 COL25A1Q9BXS0 654 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 MUTYHQ9UIF7 546 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 DNMT3LQ9UJW3 386 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 NUDT5Q9UKK9 219 aa17.93■□□□□ 0.46
RABGGTA-203ENST00000543002 MFAP3LO75121 409 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 GLI1P08151 1106 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 MMP8P22894 467 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 ZXDBP98169 803 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 FCHO2Q0JRZ9 810 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 USP4Q13107 963 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 ZNF77Q15935 545 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 TDRD12Q587J7 1177 aaKnown RBP17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 EFHC1Q5JVL4 640 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 OLFML1Q6UWY5 402 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 TOGARAM2Q6ZUX3 1019 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 FAM183BPQ6ZVS7 135 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 RSRC2Q7L4I2 434 aaKnown RBP17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 BEND5Q7L4P6 421 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 DRC7Q8IY82 874 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 SLC30A5Q8TAD4 765 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 SH3RF2Q8TEC5 729 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 RNF139Q8WU17 664 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 EDEM1Q92611 657 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 FAM149B1Q96BN6 582 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 PIWIL1Q96J94 861 aaKnown RBP17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 ZFRQ96KR1 1074 aaKnown RBP17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 TRIM62Q9BVG3 475 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 TRMT61BQ9BVS5 477 aaKnown RBP17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 OLA1Q9NTK5 396 aaKnown RBP17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 ASNSD1Q9NWL6 643 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 SMPD4Q9NXE4 827 aa17.92■□□□□ 0.46
RABGGTA-203ENST00000543002 FAM170AA1A519 330 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 AKR1B15C9JRZ8 316 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 LEFTY2O00292 366 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 MDM4O15151 490 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 FYNP06241 537 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 SCNN1AP37088 669 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 NSFP46459 744 aaKnown RBP17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 YWHAZP63104 245 aaKnown RBP17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 SLC6A3Q01959 620 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 GRM2Q14416 872 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 MSANTD2Q6P1R3 559 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 MMS22LQ6ZRQ5 1243 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 DDX42Q86XP3 938 aaKnown RBP eCLIP17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 XYLT1Q86Y38 959 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 PHF13Q86YI8 300 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 CNGA4Q8IV77 575 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 RIN3Q8TB24 985 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 KLF16Q9BXK1 252 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 ABHD10Q9NUJ1 306 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 THG1LQ9NWX6 298 aaKnown RBP17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 DUSP12Q9UNI6 340 aa17.91■□□□□ 0.46
RABGGTA-203ENST00000543002 DDX3XO00571 662 aaKnown RBP eCLIP17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 NARSO43776 548 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 ADCY5O95622 1261 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 SRFP11831 508 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 ADKP55263 362 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 GOLGA8FQ08AF8 430 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 GOLGA8DPQ0D2H9 430 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 EFEMP1Q12805 493 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 PTP4A2Q12974 167 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 MTF1Q14872 753 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 TAF5Q15542 800 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 TSR1Q2NL82 804 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 C2CD6Q53TS8 623 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 ACAD10Q6JQN1 1059 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 PPP1R2P3Q6NXS1 205 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 WDR59Q6PJI9 974 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 SLC26A9Q7LBE3 791 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 YAF2Q8IY57 180 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 UBALD2Q8IYN6 164 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 KIAA1958Q8N8K9 716 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms