RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 GPRC5AQ8NFJ5 357 aa5.52□□□□□ -1.53
KDM3B-209ENST00000542866 TMC2Q8TDI7 906 aa5.52□□□□□ -1.53
KDM3B-209ENST00000542866 SNRNP27Q8WVK2 155 aaKnown RBP5.52□□□□□ -1.53
KDM3B-209ENST00000542866 ZNF516Q92618 1163 aa5.52□□□□□ -1.53
KDM3B-209ENST00000542866 WNK4Q96J92 1243 aa5.52□□□□□ -1.53
KDM3B-209ENST00000542866 PCSK1NQ9UHG2 260 aa5.52□□□□□ -1.53
KDM3B-209ENST00000542866 PACSIN3Q9UKS6 424 aa5.52□□□□□ -1.53
KDM3B-209ENST00000542866 SOX13Q9UN79 622 aa5.52□□□□□ -1.53
KDM3B-209ENST00000542866 PLA2G4CQ9UP65 541 aa5.52□□□□□ -1.53
KDM3B-209ENST00000542866 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 CAPN14A8MX76 684 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 NDC80O14777 642 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 TNPO2O14787 897 aaKnown RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 BUD23O43709 281 aaKnown RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 ASLP04424 464 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 PABPC4LP0CB38 370 aaKnown RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 MAP3K10Q02779 954 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 FSTL1Q12841 308 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 UGCGQ16739 394 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 HSF5Q4G112 596 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 PABPC1LQ4VXU2 614 aaKnown RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 TCHHL1Q5QJ38 904 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 DRICH1Q6PGQ1 229 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 RSPH3Q86UC2 560 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 TRIM42Q8IWZ5 723 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 NAT8LQ8N9F0 302 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 TMEM161BQ8NDZ6 487 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 STKLD1Q8NE28 680 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 CEP70Q8NHQ1 597 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 PIP4K2CQ8TBX8 421 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 FAM172AQ8WUF8 416 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 HAPLN3Q96S86 360 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 RIT2Q99578 217 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 ADAMTS6Q9UKP5 1117 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 BLOC1S6Q9UL45 172 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 TMCO1Q9UM00 188 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 FARP1Q9Y4F1 1045 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 NRXN2Q9P2S2 1712 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 A0A088AWK7 358 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 TMEM191CA6NGB0 347 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 KRT37O76014 449 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 PROCP04070 461 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 ITGA2BP08514 1039 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 TMEM191BP0C7N4 346 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 DHRS4L1P0CG22 281 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 RAG1P15918 1043 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 EIF2AK2P19525 551 aaKnown RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 NCF2P19878 526 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 TPP2P29144 1249 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 CDKN2BP42772 138 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 VASPP50552 380 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 EIF3EP60228 445 aaKnown RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 OGDHQ02218 1023 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 STX3Q13277 289 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 PEX6Q13608 980 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 SH2D4BQ5SQS7 431 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 NOL9Q5SY16 702 aaKnown RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 FAXCQ5TGI0 409 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 DARS2Q6PI48 645 aaKnown RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 ZNF784Q8NCA9 323 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 SLC44A1Q8WWI5 657 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 NCSTNQ92542 709 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 NKD2Q969F2 451 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 LENG1Q96BZ8 264 aaPredicted RBP5.51□□□□□ -1.53
KDM3B-209ENST00000542866 FAF2Q96CS3 445 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 MFSD14AQ96MC6 490 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 RMDN3Q96TC7 470 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 MMP19Q99542 508 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 DHRS4Q9BTZ2 278 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 YIPF2Q9BWQ6 316 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 CALN1Q9BXU9 219 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 IFT122Q9HBG6 1241 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 GPAMQ9HCL2 828 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 KAT6AQ92794 2004 aa5.51□□□□□ -1.53
KDM3B-209ENST00000542866 CAPN8A6NHC0 703 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 NOP56O00567 594 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 LYPLA1O75608 230 aaPredicted RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 TRPA1O75762 1119 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ZMPSTE24O75844 475 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SLC25A27O95847 323 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SNRPAP09012 282 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 RBP3P10745 1247 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 PSMA2P25787 234 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 STIP1P31948 543 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 GTF2H1P32780 548 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 LIG4P49917 911 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CHN2P52757 468 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 NCKAP1LP55160 1127 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SH3BGRP55822 239 aaPredicted RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 COG7P83436 770 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 FOLH1Q04609 750 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SLC18A2Q05940 514 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 MSLNQ13421 630 aaPredicted RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CUL2Q13617 745 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CCDC142Q17RM4 750 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 LGSNQ5TDP6 509 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 MROH9Q5TGP6 573 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 TTC39BQ5VTQ0 682 aaPredicted RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SPRYD7Q5W111 196 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SLC39A4Q6P5W5 647 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms