RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 PRKCHP24723 683 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 OSTNP61366 133 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 UBAP2LQ14157 1087 aaKnown RBP13.42□□□□□ -0.26
DDX11-223ENST00000542838 ACAP1Q15027 740 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 ZCCHC23Q6ZST2 131 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 NDUFAF2Q8N183 169 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 ANKRD36BP1Q96IX9 119 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 ACO2Q99798 780 aaKnown RBP13.42□□□□□ -0.26
DDX11-223ENST00000542838 ASCC2Q9H1I8 757 aaPredicted RBP13.42□□□□□ -0.26
DDX11-223ENST00000542838 USP29Q9HBJ7 922 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 CPSF3Q9UKF6 684 aaKnown RBP13.42□□□□□ -0.26
DDX11-223ENST00000542838 HBS1LQ9Y450 684 aaKnown RBP13.42□□□□□ -0.26
DDX11-223ENST00000542838 APOEP02649 317 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 CSH1P0DML2 217 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 CSH2P0DML3 217 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 TBCCQ15814 346 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 RAB6CQ53S08 254 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 MROH9Q5TGP6 573 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 CAND1Q86VP6 1230 aaKnown RBP13.41□□□□□ -0.26
DDX11-223ENST00000542838 REPS2Q8NFH8 660 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 PRPF31Q8WWY3 499 aaKnown RBP13.41□□□□□ -0.26
DDX11-223ENST00000542838 EBF4Q9BQW3 602 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 FRMD8Q9BZ67 464 aaPredicted RBP13.41□□□□□ -0.26
DDX11-223ENST00000542838 RAB6CQ9H0N0 254 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 QTRT2Q9H974 415 aaKnown RBP13.41□□□□□ -0.26
DDX11-223ENST00000542838 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 MEI4A8MW99 385 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 ENDOD1O94919 500 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 MAP3K6O95382 1288 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 BPGMP07738 259 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 APRTP07741 180 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 SERPINA6P08185 405 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 SRGAP2CP0DJJ0 459 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 RBL1P28749 1068 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 IRX4P78413 519 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 STX3Q13277 289 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 KRT81Q14533 505 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 CDO1Q16878 200 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 NBPF20Q3BBV1 942 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 MTHFD1LQ6UB35 978 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 SLC4A11Q8NBS3 891 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 MCRS1Q96EZ8 462 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 FAM192AQ9GZU8 254 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 KLC2Q9H0B6 622 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 SDCBP2Q9H190 292 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 PLAC1Q9HBJ0 212 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 NRBP2Q9NSY0 501 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 ETNK2Q9NVF9 386 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 PPM1HQ9ULR3 514 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 HEY1Q9Y5J3 304 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 MICAL2O94851 1124 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 ZBED1O96006 694 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 PRKCBP05771 671 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 CDK18Q07002 472 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 ZNF667Q5HYK9 610 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 PPP1R14CQ8TAE6 165 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 APBB2Q92870 758 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 RNF157Q96PX1 679 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 GPAMQ9HCL2 828 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 MKS1Q9NXB0 559 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 DNAJB4Q9UDY4 337 aa13.41□□□□□ -0.26
DDX11-223ENST00000542838 ZNF214Q9UL59 606 aaPredicted RBP13.41□□□□□ -0.26
DDX11-223ENST00000542838 BRWD3Q6RI45 1802 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 COL4A5P29400 1685 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 M0QYV0 167 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 PIK3R2O00459 728 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 SNNO75324 88 aaPredicted RBP13.4□□□□□ -0.26
DDX11-223ENST00000542838 GPD1P21695 349 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 CRABP2P29373 138 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 EFNA5P52803 228 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 CDC16Q13042 620 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 C15orf59Q2T9L4 293 aaPredicted RBP13.4□□□□□ -0.26
DDX11-223ENST00000542838 UNC5AQ6ZN44 842 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 DPH6Q7L8W6 267 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 CEP120Q8N960 986 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 STKLD1Q8NE28 680 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 AGBL3Q8NEM8 1001 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 RAB3IL1Q8TBN0 382 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 LRRN4Q8WUT4 740 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 ZBED3Q96IU2 234 aaPredicted RBP13.4□□□□□ -0.26
DDX11-223ENST00000542838 TEPSINQ96N21 525 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 TUBGCP5Q96RT8 1024 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 TRIM56Q9BRZ2 755 aaKnown RBP13.4□□□□□ -0.26
DDX11-223ENST00000542838 C1orf21Q9H246 121 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 ACAD9Q9H845 621 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 ETAA1Q9NY74 926 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 MAD1L1Q9Y6D9 718 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 ARHGAP42A6NI28 874 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 SLC15A5A6NIM6 579 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 PRPSAP2O60256 369 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 FKBP6O75344 327 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 ATP5BP06576 529 aaKnown RBP13.4□□□□□ -0.26
DDX11-223ENST00000542838 ZNF143P52747 638 aaPredicted RBP13.4□□□□□ -0.26
DDX11-223ENST00000542838 PTPN11Q06124 597 aaPredicted RBP13.4□□□□□ -0.26
DDX11-223ENST00000542838 WASHC5Q12768 1159 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 TMEM132BQ14DG7 1078 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 STXBP2Q15833 593 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 TMCO4Q5TGY1 634 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 PLD5Q8N7P1 536 aa13.4□□□□□ -0.26
DDX11-223ENST00000542838 GSTCDQ8NEC7 633 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms