RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-222ENST00000542777 BYSLQ13895 437 aaKnown RBP16.96■□□□□ 0.31
DDX11-222ENST00000542777 C1orf220Q5T0J3 134 aa16.96■□□□□ 0.31
DDX11-222ENST00000542777 HTR3DQ70Z44 454 aa16.96■□□□□ 0.31
DDX11-222ENST00000542777 TRMT11Q7Z4G4 463 aaKnown RBP16.96■□□□□ 0.31
DDX11-222ENST00000542777 ZNF513Q8N8E2 541 aaPredicted RBP16.96■□□□□ 0.31
DDX11-222ENST00000542777 KCNV2Q8TDN2 545 aa16.96■□□□□ 0.31
DDX11-222ENST00000542777 KLF16Q9BXK1 252 aaPredicted RBP16.96■□□□□ 0.31
DDX11-222ENST00000542777 TMEM9BQ9NQ34 198 aa16.96■□□□□ 0.31
DDX11-222ENST00000542777 TRAF3IP3Q9Y228 551 aa16.96■□□□□ 0.31
DDX11-222ENST00000542777 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 TRIM24O15164 1050 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 KIF20AO95235 890 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 ATP5C1P36542 298 aaKnown RBP16.95■□□□□ 0.3
DDX11-222ENST00000542777 NOVA1P51513 510 aaKnown RBP16.95■□□□□ 0.3
DDX11-222ENST00000542777 VAMP7P51809 220 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 SHC2P98077 582 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 MAP7D1Q3KQU3 841 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 C10orf76Q5T2E6 689 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 CLEC20AQ6ZU45 233 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 GPRIN1Q7Z2K8 1008 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 TMEFF1Q8IYR6 380 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 TERB1Q8NA31 727 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 JAKMIP2Q96AA8 810 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 CYFIP2Q96F07 1278 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 TWNKQ96RR1 684 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 HNRNPABQ99729 332 aaKnown RBP16.95■□□□□ 0.3
DDX11-222ENST00000542777 IMPG2Q9BZV3 1241 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 MBD1Q9UIS9 605 aaPredicted RBP16.95■□□□□ 0.3
DDX11-222ENST00000542777 SCML2Q9UQR0 700 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 HPSEQ9Y251 543 aa16.95■□□□□ 0.3
DDX11-222ENST00000542777 KMT2BQ9UMN6 2715 aaPredicted RBP16.94■□□□□ 0.3
DDX11-222ENST00000542777 HHLA1C9JL84 531 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 CDX4O14627 284 aaPredicted RBP16.94■□□□□ 0.3
DDX11-222ENST00000542777 MAPK13O15264 365 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 GREM1O60565 184 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 ACO1P21399 889 aaKnown RBP16.94■□□□□ 0.3
DDX11-222ENST00000542777 GOLGA8FQ08AF8 430 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 GOLGA8DPQ0D2H9 430 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 INCA1Q0VD86 236 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 GRAMD4Q6IC98 578 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 ARMCX6Q7L4S7 300 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 CCDC47Q96A33 483 aaKnown RBP16.94■□□□□ 0.3
DDX11-222ENST00000542777 SPATA32Q96LK8 384 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 XPO6Q96QU8 1125 aaKnown RBP16.94■□□□□ 0.3
DDX11-222ENST00000542777 NT5C1AQ9BXI3 368 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 CYP3A43Q9HB55 503 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 CYLDQ9NQC7 956 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 OSER1Q9NX31 292 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 EVLQ9UI08 416 aaPredicted RBP16.94■□□□□ 0.3
DDX11-222ENST00000542777 LSM7Q9UK45 103 aaKnown RBP16.94■□□□□ 0.3
DDX11-222ENST00000542777 MAP1BP46821 2468 aaKnown RBP16.94■□□□□ 0.3
DDX11-222ENST00000542777 PLXND1Q9Y4D7 1925 aa16.94■□□□□ 0.3
DDX11-222ENST00000542777 TNRC6BQ9UPQ9 1833 aaKnown RBP16.93■□□□□ 0.3
DDX11-222ENST00000542777 NEDD8-MDP1E9PL57 170 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 GIPC1O14908 333 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 CYP26A1O43174 497 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 TRIM49P0CI25 452 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 TRIM49CP0CI26 452 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 NR2F2P24468 414 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 NTSR1P30989 418 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 WASP42768 502 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 PTGER3P43115 390 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 SYKP43405 635 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 GCLMP48507 274 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 UAP1L1Q3KQV9 507 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 TRIM61Q5EBN2 209 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 SPDYCQ5MJ68 293 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 SH3PXD2AQ5TCZ1 1133 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 TPGS1Q6ZTW0 290 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 SYT12Q8IV01 421 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 TAS1R2Q8TE23 839 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 BBS2Q9BXC9 721 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 NUSAP1Q9BXS6 441 aaKnown RBP16.93■□□□□ 0.3
DDX11-222ENST00000542777 APOBEC3GQ9HC16 384 aaKnown RBP16.93■□□□□ 0.3
DDX11-222ENST00000542777 TMEM74BQ9NUR3 256 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 DNAJC17Q9NVM6 304 aaKnown RBP16.93■□□□□ 0.3
DDX11-222ENST00000542777 WDR35Q9P2L0 1181 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 HCN2Q9UL51 889 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 MAPK8IP1Q9UQF2 711 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 STARD13Q9Y3M8 1113 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 PCDHA5Q9Y5H7 936 aa16.93■□□□□ 0.3
DDX11-222ENST00000542777 CEP192Q8TEP8 1941 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 A0A1W2PQH9 124 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 CACNG3O60359 315 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 RHOBTB3O94955 611 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 PRR29P0C7W0 189 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 RARGP13631 454 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 KRT13P13646 458 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 HOXB2P14652 356 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 TYRP14679 529 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 GABRG2P18507 467 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 CD58P19256 250 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 PLA2G4AP47712 749 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 PPP3CAQ08209 521 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 NFIL3Q16649 462 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 LYSMD4Q5XG99 296 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 EGFLAMQ63HQ2 1017 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 SDE2Q6IQ49 451 aa16.92■□□□□ 0.3
DDX11-222ENST00000542777 INTS8Q75QN2 995 aaKnown RBP16.92■□□□□ 0.3
DDX11-222ENST00000542777 MIB1Q86YT6 1006 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms