RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 C7orf25Q9BPX7 421 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 PARD6BQ9BYG5 372 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 TSGA10Q9BZW7 698 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 TRIM4Q9C037 500 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 GSTO2Q9H4Y5 243 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 BICC1Q9H694 974 aaKnown RBP6.35□□□□□ -1.39
XRCC4-206ENST00000542685 MANSC1Q9H8J5 431 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 FAM204AQ9H8W3 233 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 EBF2Q9HAK2 575 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 GALNT9Q9HCQ5 603 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 CASS4Q9NQ75 786 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 FAM30AQ9NZY2 134 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 STAP2Q9UGK3 403 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 HOOK1Q9UJC3 728 aaKnown RBP6.35□□□□□ -1.39
XRCC4-206ENST00000542685 TMCO1Q9UM00 188 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 PRKAB1Q9Y478 270 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 RIPOR2Q9Y4F9 1068 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 AGLP35573 1532 aa6.35□□□□□ -1.39
XRCC4-206ENST00000542685 MAST3O60307 1309 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 CDHR2Q9BYE9 1310 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 CDHR4A6H8M9 788 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 USP27XA6NNY8 438 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 PRC1O43663 620 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 ERN1O75460 977 aaKnown RBP6.34□□□□□ -1.39
XRCC4-206ENST00000542685 PYGLP06737 847 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 CKBP12277 381 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 ALAS1P13196 640 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 SFPQP23246 707 aaKnown RBP eCLIP6.34□□□□□ -1.39
XRCC4-206ENST00000542685 PRKAR2BP31323 418 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 PTH2RP49190 550 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 CREMQ03060 361 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 USH1GQ495M9 461 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 PRR16Q569H4 304 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 SH2D4BQ5SQS7 431 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 ARMC9Q7Z3E5 817 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 RSPH3Q86UC2 560 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 FITM2Q8N6M3 262 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 CUL5Q93034 780 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 PPP2R3CQ969Q6 453 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 NACC2Q96BF6 587 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 ZNF764Q96H86 408 aaPredicted RBP6.34□□□□□ -1.39
XRCC4-206ENST00000542685 BOD1Q96IK1 185 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 RUFY1Q96T51 708 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 TSC22D3Q99576 134 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 CARD6Q9BX69 1037 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 BHMT2Q9H2M3 363 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 RSAD1Q9HA92 442 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 PAPOLBQ9NRJ5 636 aaKnown RBP6.34□□□□□ -1.39
XRCC4-206ENST00000542685 ZNF277Q9NRM2 450 aaPredicted RBP6.34□□□□□ -1.39
XRCC4-206ENST00000542685 TBCCD1Q9NVR7 557 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 QPCTLQ9NXS2 382 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 SPATA7Q9P0W8 599 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 DDX20Q9UHI6 824 aaKnown RBP6.34□□□□□ -1.39
XRCC4-206ENST00000542685 KCNE5Q9UJ90 142 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 TMEM98Q9Y2Y6 226 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 INSL6Q9Y581 213 aa6.34□□□□□ -1.39
XRCC4-206ENST00000542685 A2ML1A8K2U0 1454 aa6.34□□□□□ -1.4
XRCC4-206ENST00000542685 TSPOAP1O95153 1857 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 GOLGA8KD6RF30 607 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 K7ESF4 209 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 RNF8O76064 485 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 CCDC175P0C221 793 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 CCDC166P0CW27 439 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 RANBP1P43487 201 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 PSMC4P43686 418 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 CCT5P48643 541 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 CCT4P50991 539 aaKnown RBP6.33□□□□□ -1.4
XRCC4-206ENST00000542685 PDE1AP54750 535 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 NOMO3P69849 1222 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 BLMHQ13867 455 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 KCNB1Q14721 858 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 CASP8Q14790 479 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 STX1AQ16623 288 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 CYP2A13Q16696 494 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 SGSM1Q2NKQ1 1148 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 ANO6Q4KMQ2 910 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 NOMO2Q5JPE7 1267 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 SFMBT2Q5VUG0 894 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 PGM2L1Q6PCE3 622 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 RD3Q7Z3Z2 195 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 SRGAP1Q7Z6B7 1085 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 ANKRD13BQ86YJ7 626 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 LRRC43Q8N309 656 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 CNTD1Q8N815 330 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 SIMC1Q8NDZ2 872 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 TBC1D15Q8TC07 691 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 NTN5Q8WTR8 489 aaPredicted RBP6.33□□□□□ -1.4
XRCC4-206ENST00000542685 RAB24Q969Q5 203 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 SCLT1Q96NL6 688 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 BPIFA3Q9BQP9 254 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 TNMDQ9H2S6 317 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 R3HDMLQ9H3Y0 253 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 CLSTN2Q9H4D0 955 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 PRDM13Q9H4Q3 707 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 ZWILCHQ9H900 591 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 TMEM74BQ9NUR3 256 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 SLC5A4Q9NY91 659 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 CTNNAL1Q9UBT7 734 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 DDX25Q9UHL0 483 aaKnown RBP6.33□□□□□ -1.4
XRCC4-206ENST00000542685 TMED5Q9Y3A6 229 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms