RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 NAIF1Q69YI7 327 aaPredicted RBP16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 FSTL4Q6MZW2 842 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 SASS6Q6UVJ0 657 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 C11orf57Q6ZUT1 292 aaPredicted RBP16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 HTR3DQ70Z44 454 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 SCML4Q8N228 414 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 ARHGAP18Q8N392 663 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 SYNPOQ8N3V7 929 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 SHC3Q92529 594 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 OTUB2Q96DC9 234 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 ULBP1Q9BZM6 244 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 NACA2Q9H009 215 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 PRMT8Q9NR22 394 aaPredicted RBP16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 RBM12Q9NTZ6 932 aaKnown RBP16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 ANO10Q9NW15 660 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 TMEM63CQ9P1W3 806 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 DNMT3LQ9UJW3 386 aa16.24■□□□□ 0.19
ECHDC2-223ENST00000542552 MYOFQ9NZM1 2061 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 SCAMP3O14828 347 aaKnown RBP16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 LAMTOR5O43504 91 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 CYP17A1P05093 508 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 KRT5P13647 590 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 DHCR24Q15392 516 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 STX1AQ16623 288 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 C10orf120Q5SQS8 335 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 PMF1Q6P1K2 205 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 RHBDF2Q6PJF5 856 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 TADA2BQ86TJ2 420 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 SPEM1Q8N4L4 309 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 NELL1Q92832 810 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 SECISBP2LQ93073 1101 aaKnown RBP16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 CDK5RAP1Q96SZ6 601 aaKnown RBP16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 P2RY13Q9BPV8 354 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 LRRC4Q9HBW1 653 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 AJAP1Q9UKB5 411 aaPredicted RBP16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 NUDT5Q9UKK9 219 aa16.23■□□□□ 0.19
ECHDC2-223ENST00000542552 M0QYV0 167 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 MDM4O15151 490 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 RALAP11233 206 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 TDGF1P13385 188 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 DRD1P21728 446 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 OPRD1P41143 372 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 GPD2P43304 727 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 YWHAGP61981 247 aaKnown RBP eCLIP16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 ADIGQ0VDE8 80 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 KCNMA1Q12791 1236 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 GRSF1Q12849 480 aaKnown RBP eCLIP16.22■□□□□ 0.193e-8■□□□□ 9.2
ECHDC2-223ENST00000542552 Q6ZS52 159 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 BBS7Q8IWZ6 715 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 ZNF606Q8WXB4 792 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 NDRG1Q92597 394 aaKnown RBP16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 HSFY1Q96LI6 401 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 CNGB3Q9NQW8 809 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 FANCLQ9NW38 375 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 SH3BP1Q9Y3L3 701 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 KIAA1549LQ6ZVL6 1849 aa16.22■□□□□ 0.19
ECHDC2-223ENST00000542552 YJEFN3A6XGL0 299 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 E7ENQ6 273 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 PAPSS2O95340 614 aaPredicted RBP16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 IRF1P10914 325 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 DAOAP59103 153 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 CSTF1Q05048 431 aaKnown RBP16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 ARHGAP44Q17R89 818 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 DENND1BQ6P3S1 775 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 SIX6OS1Q8N1H7 587 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 STK32AQ8WU08 396 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 EZH1Q92800 747 aaPredicted RBP16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 CD101Q93033 1021 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 EXOC4Q96A65 974 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 ACP6Q9NPH0 428 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 DNAJC12Q9UKB3 198 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 ZNF292O60281 2723 aa16.21■□□□□ 0.19
ECHDC2-223ENST00000542552 FOXN3O00409 490 aaPredicted RBP16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 MED7O43513 233 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 STC2O76061 302 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 LETM1O95202 739 aaPredicted RBP16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 ADH1CP00326 375 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 EGFP01133 1207 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 GNA15P30679 374 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 RGS7P49802 495 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 CCR3P51677 355 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 MYL5Q02045 173 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 TYRO3Q06418 890 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 GOLGA8FQ08AF8 430 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 GOLGA8DPQ0D2H9 430 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 KRT31Q15323 416 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 LY6G5CQ5SRR4 150 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 BSPRYQ5W0U4 402 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 Q6ZNB5 142 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 MIB1Q86YT6 1006 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 IRGQQ8WZA9 623 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 NAA15Q9BXJ9 866 aaKnown RBP16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 HSD3B7Q9H2F3 369 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 C2orf42Q9NWW7 574 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 TAB2Q9NYJ8 693 aa16.2■□□□□ 0.18
ECHDC2-223ENST00000542552 A0A0A0MRY4 1105 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 CHURC1-FNTBB4DL54 471 aa16.19■□□□□ 0.18
ECHDC2-223ENST00000542552 HOXC11O43248 304 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms