RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SNNO75324 88 aaPredicted RBP9.92□□□□□ -0.82
CNOT4-212ENST00000541284 UPP2O95045 317 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 MT-ND3P03897 115 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 TROVE2P10155 538 aaKnown RBP eCLIP9.92□□□□□ -0.82
CNOT4-212ENST00000541284 KPNB1Q14974 876 aaKnown RBP9.92□□□□□ -0.82
CNOT4-212ENST00000541284 FYB2Q5VWT5 728 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 FAM160B1Q5W0V3 765 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 CCDC62Q6P9F0 684 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 RXFP2Q8WXD0 754 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 NSL1Q96IY1 281 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 C11orf84Q9BUA3 381 aaPredicted RBP9.92□□□□□ -0.82
CNOT4-212ENST00000541284 TRIM55Q9BYV6 548 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 ADARB2Q9NS39 739 aaKnown RBP9.92□□□□□ -0.82
CNOT4-212ENST00000541284 PLLPQ9Y342 182 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 SCN1AP35498 2009 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 KIAA1671Q9BY89 1806 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 CFAP69A5D8W1 941 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 H0Y3Z8 333 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 FCHO1O14526 889 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 ITGB3P05106 788 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 TFE3P19532 575 aaPredicted RBP9.92□□□□□ -0.82
CNOT4-212ENST00000541284 STIP1P31948 543 aaKnown RBP9.92□□□□□ -0.82
CNOT4-212ENST00000541284 ARFIP2P53365 341 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 TUBB3Q13509 450 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 OLFML1Q6UWY5 402 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 KBTBD2Q8IY47 623 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 MPP5Q8N3R9 675 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 UBA3Q8TBC4 463 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 CNKSR2Q8WXI2 1034 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 IFT43Q96FT9 208 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 ANKRD36BP1Q96IX9 119 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 SIGLEC10Q96LC7 697 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 ZNF778Q96MU6 729 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 CNPY3Q9BT09 278 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 CALN1Q9BXU9 219 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 DCLRE1BQ9H816 532 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 PCDH18Q9HCL0 1135 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 SLC45A1Q9Y2W3 748 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 MTO1Q9Y2Z2 717 aaKnown RBP9.92□□□□□ -0.82
CNOT4-212ENST00000541284 CENPFP49454 3210 aa9.92□□□□□ -0.82
CNOT4-212ENST00000541284 IQANK1A0A1B0GTG1 560 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 BCLAF3A2AJT9 711 aaKnown RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 TRIM49D1C9J1S8 452 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 M0QYV0 167 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 CYB561D2O14569 222 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 GAS2O43903 313 aaKnown RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 CCDC22O60826 627 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 TOP3BO95985 862 aaKnown RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 TNNC2P02585 160 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 HMGCRP04035 888 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 PRKCGP05129 697 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 TGFB3P10600 412 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 MYL2P10916 166 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 RBL1P28749 1068 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 CCNHP51946 323 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 CDH6P55285 790 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 SLC10A2Q12908 348 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 SLC10A6Q3KNW5 377 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 ZNF667Q5HYK9 610 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 FAM102AQ5T9C2 384 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 FAXCQ5TGI0 409 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 TRMT10BQ6PF06 316 aaKnown RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 PLPPR4Q7Z2D5 763 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 SLC26A11Q86WA9 606 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 SHKBP1Q8TBC3 707 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 ZC3H15Q8WU90 426 aaKnown RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 TTC17Q96AE7 1141 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 C7orf26Q96N11 449 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 MAGEB5Q9BZ81 275 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 GPATCH2LQ9NWQ4 482 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 ARMCX1Q9P291 453 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 FAM159BA6NKW6 160 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 EIF4E1BA6NMX2 242 aaKnown RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 PIK3R2O00459 728 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 TBX10O75333 385 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 IL18RAPO95256 599 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 METTL18O95568 372 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 GPD1P21695 349 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 RASSF2P50749 326 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 RAP1GDS1P52306 607 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 BST1Q10588 318 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 CELF3Q5SZQ8 465 aaKnown RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 DARS2Q6PI48 645 aaKnown RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 C1orf228Q6PIY5 440 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 DLK2Q6UY11 383 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 UNC5AQ6ZN44 842 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 FAM167AQ96KS9 214 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 SYT15Q9BQS2 421 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 NFKBIZQ9BYH8 718 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 TRIM6Q9C030 488 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 C2orf40Q9H1Z8 148 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 MMADHCQ9H3L0 296 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 PDZD7Q9H5P4 517 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 KAT6AQ92794 2004 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 DPPA5A6NC42 116 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 SPAG6O75602 509 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 C22orf31O95567 290 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 CLCN3P51790 818 aa9.91□□□□□ -0.82
CNOT4-212ENST00000541284 TTC39BQ5VTQ0 682 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-212ENST00000541284 LCLAT1Q6UWP7 414 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms