RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 TMEM196Q5HYL7 178 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 DGKKQ5KSL6 1271 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 C1orf210Q8IVY1 113 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 TTC8Q8TAM2 541 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 HSFY1Q96LI6 401 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 BPIFA3Q9BQP9 254 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 ULBP1Q9BZM6 244 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 NACA2Q9H009 215 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 LINC00597Q9H2U6 94 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 FANCLQ9NW38 375 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 TAB2Q9NYJ8 693 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 DNMT3LQ9UJW3 386 aa13.77□□□□□ -0.21
LTBR-208ENST00000541005 AJAP1Q9UKB5 411 aaPredicted RBP13.77□□□□□ -0.21
LTBR-208ENST00000541005 MED7O43513 233 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 GREM1O60565 184 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 TBX18O95935 607 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 CALCAP01258 141 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 CYP17A1P05093 508 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 GPD2P43304 727 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 YWHAGP61981 247 aaKnown RBP eCLIP13.76□□□□□ -0.21
LTBR-208ENST00000541005 GOLGA8FQ08AF8 430 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 GOLGA8DPQ0D2H9 430 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 NR1H3Q13133 447 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 PON2Q15165 354 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 ARHGAP44Q17R89 818 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 GAB4Q2WGN9 574 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 C10orf120Q5SQS8 335 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 KLHDC7AQ5VTJ3 777 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 PMF1Q6P1K2 205 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 HTR3DQ70Z44 454 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 FAM71AQ8IYT1 594 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 ADGRG2Q8IZP9 1017 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 SIX6OS1Q8N1H7 587 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 SYNPOQ8N3V7 929 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 STK32AQ8WU08 396 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 ZNF606Q8WXB4 792 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 IRGQQ8WZA9 623 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 EXOC4Q96A65 974 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 FUCA2Q9BTY2 467 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 NAA15Q9BXJ9 866 aaKnown RBP13.76□□□□□ -0.21
LTBR-208ENST00000541005 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
LTBR-208ENST00000541005 PLCB1Q9NQ66 1216 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 PRMT8Q9NR22 394 aaPredicted RBP13.76□□□□□ -0.21
LTBR-208ENST00000541005 LIMA1Q9UHB6 759 aaKnown RBP13.76□□□□□ -0.21
LTBR-208ENST00000541005 DNAJC12Q9UKB3 198 aa13.76□□□□□ -0.21
LTBR-208ENST00000541005 OTOGLQ3ZCN5 2332 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 LRRC10BA6NIK2 292 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 FBXO21O94952 628 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 LETM1O95202 739 aaPredicted RBP13.75□□□□□ -0.21
LTBR-208ENST00000541005 ADH1CP00326 375 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 TPM2P07951 284 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 UCHL3P15374 230 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 DAOAP59103 153 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 ANO6Q4KMQ2 910 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 FSTL4Q6MZW2 842 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 Q6ZNB5 142 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 MAML2Q8IZL2 1156 aaPredicted RBP13.75□□□□□ -0.21
LTBR-208ENST00000541005 TTC16Q8NEE8 873 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 ANKRD20A12PQ8NF67 263 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 WBP2Q969T9 261 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 FAM122AQ96E09 287 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 SLC4A5Q9BY07 1137 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 LMAN1LQ9HAT1 526 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 ACP6Q9NPH0 428 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 OLA1Q9NTK5 396 aaKnown RBP13.75□□□□□ -0.21
LTBR-208ENST00000541005 FBXO4Q9UKT5 387 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 PCDHGC3Q9UN70 934 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 SH3BP1Q9Y3L3 701 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 DAAM1Q9Y4D1 1078 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 FHOD1Q9Y613 1164 aa13.75□□□□□ -0.21
LTBR-208ENST00000541005 YJEFN3A6XGL0 299 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 LGALS16A8MUM7 142 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 E7ENQ6 273 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 H0Y858 1186 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 FOXN3O00409 490 aaPredicted RBP13.74□□□□□ -0.21
LTBR-208ENST00000541005 PES1O00541 588 aaKnown RBP13.74□□□□□ -0.21
LTBR-208ENST00000541005 MDM4O15151 490 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 HOXC11O43248 304 aaPredicted RBP13.74□□□□□ -0.21
LTBR-208ENST00000541005 THAP12O43422 761 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 DRD1P21728 446 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 EIF2DP41214 584 aaKnown RBP13.74□□□□□ -0.21
LTBR-208ENST00000541005 ACADSBP45954 432 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 RGS7P49802 495 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 COPB1P53618 953 aaKnown RBP13.74□□□□□ -0.21
LTBR-208ENST00000541005 COG7P83436 770 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 PTK2Q05397 1052 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 GRSF1Q12849 480 aaKnown RBP eCLIP13.74□□□□□ -0.21
LTBR-208ENST00000541005 MTAPQ13126 283 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 DHCR24Q15392 516 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 ZNF528Q3MIS6 628 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 FKBP15Q5T1M5 1219 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 MSANTD2Q6P1R3 559 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 DENND1BQ6P3S1 775 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 APTXQ7Z2E3 356 aaKnown RBP13.74□□□□□ -0.21
LTBR-208ENST00000541005 BBS7Q8IWZ6 715 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 AOPEPQ8N6M6 819 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 P2RY13Q9BPV8 354 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 LSM14BQ9BX40 385 aaKnown RBP13.74□□□□□ -0.21
LTBR-208ENST00000541005 VPS16Q9H269 839 aa13.74□□□□□ -0.21
LTBR-208ENST00000541005 GANQ9H2C0 597 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms