RNA–Protein interactions for RNA: ENST00000540554.1

FERMT3-203, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-203ENST00000540554 NEDD8-MDP1E9PL57 170 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 HLA-DRAP01903 254 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 RPN1P04843 607 aaKnown RBP18.24■□□□□ 0.51
FERMT3-203ENST00000540554 ZDHHC11BP0C7U3 371 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 FAM200BP0CF97 657 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 HOXB2P14652 356 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 WASP42768 502 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 IRX4P78413 519 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 SHC2P98077 582 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 FOXC1Q12948 553 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 GRAMD4Q6IC98 578 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 TMEM25Q86YD3 366 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 SLC9A9Q8IVB4 645 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 ETFBKMTQ8IXQ9 262 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 TMC2Q8TDI7 906 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 TAF4BQ92750 862 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 NUSAP1Q9BXS6 441 aaKnown RBP18.24■□□□□ 0.51
FERMT3-203ENST00000540554 KCTD10Q9H3F6 313 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 DNAJC17Q9NVM6 304 aaKnown RBP18.24■□□□□ 0.51
FERMT3-203ENST00000540554 IL37Q9NZH6 218 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 LAMA1P25391 3075 aa18.24■□□□□ 0.51
FERMT3-203ENST00000540554 A0A0A0MRY4 1105 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 PDXKO00764 312 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 CYP26A1O43174 497 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 CALUO43852 315 aaPredicted RBP18.23■□□□□ 0.51
FERMT3-203ENST00000540554 CHRM1P11229 460 aaPredicted RBP18.23■□□□□ 0.51
FERMT3-203ENST00000540554 PFKFB1P16118 471 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 PTGER3P43115 390 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 ASPAP45381 313 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 MAPK8P45983 427 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 PKP1Q13835 747 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 LYSMD4Q5XG99 296 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 TPGS1Q6ZTW0 290 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 SV2AQ7L0J3 742 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 UNC93AQ86WB7 457 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 C12orf29Q8N999 325 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 CCDC47Q96A33 483 aaKnown RBP18.23■□□□□ 0.51
FERMT3-203ENST00000540554 ERLEC1Q96DZ1 483 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 BBS2Q9BXC9 721 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 MMRN2Q9H8L6 949 aa18.23■□□□□ 0.51
FERMT3-203ENST00000540554 MBD1Q9UIS9 605 aaPredicted RBP18.23■□□□□ 0.51
FERMT3-203ENST00000540554 A0A1B0GVL5 298 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 FAM92AA1XBS5 289 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 TRIM24O15164 1050 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 ZBTB24O43167 697 aaPredicted RBP18.22■□□□□ 0.51
FERMT3-203ENST00000540554 KIF20AO95235 890 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 TBX18O95935 607 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 ASS1P00966 412 aaKnown RBP18.22■□□□□ 0.51
FERMT3-203ENST00000540554 CFIP05156 583 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 ATP5C1P36542 298 aaKnown RBP18.22■□□□□ 0.51
FERMT3-203ENST00000540554 PGFP49763 221 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 RPL6Q02878 288 aaKnown RBP18.22■□□□□ 0.51
FERMT3-203ENST00000540554 LMAN2Q12907 356 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 MAP7D1Q3KQU3 841 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 GPRIN1Q7Z2K8 1008 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 SYT12Q8IV01 421 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 CRYBG2Q8N1P7 616 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 XPO6Q96QU8 1125 aaKnown RBP18.22■□□□□ 0.51
FERMT3-203ENST00000540554 CSNK1G1Q9HCP0 422 aa18.22■□□□□ 0.51
FERMT3-203ENST00000540554 EVLQ9UI08 416 aaPredicted RBP18.22■□□□□ 0.51
FERMT3-203ENST00000540554 CACNA1EQ15878 2313 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 CDX4O14627 284 aaPredicted RBP18.21■□□□□ 0.51
FERMT3-203ENST00000540554 MDM4O15151 490 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 AP5Z1O43299 807 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 TRIM49P0CI25 452 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 TRIM49CP0CI26 452 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 TYRP14679 529 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 GABRG2P18507 467 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 CD58P19256 250 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 ACO1P21399 889 aaKnown RBP18.21■□□□□ 0.51
FERMT3-203ENST00000540554 NTSR1P30989 418 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 DPP6P42658 865 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 VAMP7P51809 220 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 EGFLAMQ63HQ2 1017 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 SDE2Q6IQ49 451 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 CLEC20AQ6ZU45 233 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 CHPFQ8IZ52 775 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 DEFB119Q8N690 84 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 DEFB124Q8NES8 71 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 KCNV2Q8TDN2 545 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 BHMTQ93088 406 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 TWNKQ96RR1 684 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 KLF16Q9BXK1 252 aaPredicted RBP18.21■□□□□ 0.51
FERMT3-203ENST00000540554 CALCOCO1Q9P1Z2 691 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 USP25Q9UHP3 1055 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 NUDT5Q9UKK9 219 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 RCOR1Q9UKL0 485 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 SCML2Q9UQR0 700 aa18.21■□□□□ 0.51
FERMT3-203ENST00000540554 TMEM131Q92545 1883 aa18.2■□□□□ 0.5
FERMT3-203ENST00000540554 IKBKBO14920 756 aa18.2■□□□□ 0.5
FERMT3-203ENST00000540554 CACNG3O60359 315 aa18.2■□□□□ 0.5
FERMT3-203ENST00000540554 KRT13P13646 458 aa18.2■□□□□ 0.5
FERMT3-203ENST00000540554 CSRP1P21291 193 aaKnown RBP18.2■□□□□ 0.5
FERMT3-203ENST00000540554 ITPKAP23677 461 aa18.2■□□□□ 0.5
FERMT3-203ENST00000540554 NR2F2P24468 414 aa18.2■□□□□ 0.5
FERMT3-203ENST00000540554 GCLMP48507 274 aa18.2■□□□□ 0.5
FERMT3-203ENST00000540554 C10orf120Q5SQS8 335 aa18.2■□□□□ 0.5
FERMT3-203ENST00000540554 SLC36A4Q6YBV0 504 aa18.2■□□□□ 0.5
FERMT3-203ENST00000540554 HTR3DQ70Z44 454 aa18.2■□□□□ 0.5
FERMT3-203ENST00000540554 CCDC150Q8NCX0 1101 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms