RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 FAXDC2Q96IV6 333 aa20.34■□□□□ 0.85
SOD2-212ENST00000540491 HNRNPABQ99729 332 aaKnown RBP20.34■□□□□ 0.85
SOD2-212ENST00000540491 SMOQ99835 787 aa20.34■□□□□ 0.85
SOD2-212ENST00000540491 SDCBP2Q9H190 292 aa20.34■□□□□ 0.85
SOD2-212ENST00000540491 MARK1Q9P0L2 795 aa20.34■□□□□ 0.85
SOD2-212ENST00000540491 SERTAD1Q9UHV2 236 aa20.34■□□□□ 0.85
SOD2-212ENST00000540491 TCRBV21S2A2A0A5A6 115 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 ACTN4O43707 911 aaKnown RBP20.33■□□□□ 0.85
SOD2-212ENST00000540491 CACNG3O60359 315 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 CMA1P23946 247 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 MAP3K7CLP57077 242 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 KDSRQ06136 332 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 INCA1Q0VD86 236 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 MESP2Q0VG99 397 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 E2F5Q15329 346 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 KMT5BQ4FZB7 885 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 TRIM61Q5EBN2 209 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 SH3PXD2AQ5TCZ1 1133 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 PEAR1Q5VY43 1037 aaPredicted RBP20.33■□□□□ 0.85
SOD2-212ENST00000540491 LYSMD4Q5XG99 296 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 TMEM25Q86YD3 366 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 HMGB4Q8WW32 186 aa20.33■□□□□ 0.85
SOD2-212ENST00000540491 CDK5RAP1Q96SZ6 601 aaKnown RBP20.33■□□□□ 0.85
SOD2-212ENST00000540491 KLF16Q9BXK1 252 aaPredicted RBP20.33■□□□□ 0.85
SOD2-212ENST00000540491 NUP205Q92621 2012 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 THADAQ6YHU6 1953 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.32■□□□□ 0.84
SOD2-212ENST00000540491 GFRA2O00451 464 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 SCAMP3O14828 347 aaKnown RBP20.32■□□□□ 0.84
SOD2-212ENST00000540491 PLA2G4AP47712 749 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 C10orf76Q5T2E6 689 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 FOXD4L5Q5VV16 416 aaPredicted RBP20.32■□□□□ 0.84
SOD2-212ENST00000540491 CEP135Q66GS9 1140 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 GRAMD4Q6IC98 578 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 INTS8Q75QN2 995 aaKnown RBP20.32■□□□□ 0.84
SOD2-212ENST00000540491 TTC39CQ8N584 583 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 NAT16Q8N8M0 369 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 CCDC150Q8NCX0 1101 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 RLN3Q8WXF3 142 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 FOXD4L4Q8WXT5 416 aaPredicted RBP20.32■□□□□ 0.84
SOD2-212ENST00000540491 NT5C1AQ9BXI3 368 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 SLC32A1Q9H598 525 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 FAM124BQ9H5Z6 455 aaPredicted RBP20.32■□□□□ 0.84
SOD2-212ENST00000540491 CIZ1Q9ULV3 898 aaPredicted RBP20.32■□□□□ 0.84
SOD2-212ENST00000540491 ZNF510Q9Y2H8 683 aa20.32■□□□□ 0.84
SOD2-212ENST00000540491 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 UPK3BL1B0FP48 263 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 UPK3BL2E5RIL1 263 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 PROS1P07225 676 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 CCDC130P13994 396 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 HOXB2P14652 356 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 RPL13P26373 211 aaKnown RBP20.31■□□□□ 0.84
SOD2-212ENST00000540491 PIK3CAP42336 1068 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 ASPAP45381 313 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 VAMP7P51809 220 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 DLG4P78352 724 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 DUOXA1Q1HG43 343 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 SFTPA1Q8IWL2 248 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 TMEFF1Q8IYR6 380 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 CYFIP2Q96F07 1278 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 BBS2Q9BXC9 721 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 DNAJC17Q9NVM6 304 aaKnown RBP20.31■□□□□ 0.84
SOD2-212ENST00000540491 DNMT3LQ9UJW3 386 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 PILRBQ9UKJ0 227 aa20.31■□□□□ 0.84
SOD2-212ENST00000540491 LAMA1P25391 3075 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 MYO18AQ92614 2054 aaKnown RBP20.3■□□□□ 0.84
SOD2-212ENST00000540491 ANTXRLA6NF34 631 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 PATE3B3GLJ2 98 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 NPC1O15118 1278 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 GREM1O60565 184 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 BEST1O76090 585 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 HLA-DRAP01903 254 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 ZNF132P52740 706 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 DNM1Q05193 864 aaKnown RBP20.3■□□□□ 0.84
SOD2-212ENST00000540491 ZNF252P-AS1Q0IIN9 211 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
SOD2-212ENST00000540491 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
SOD2-212ENST00000540491 CLEC20AQ6ZU45 233 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 GRAMD1CQ8IYS0 662 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 C12orf29Q8N999 325 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 MBD1Q9UIS9 605 aaPredicted RBP20.3■□□□□ 0.84
SOD2-212ENST00000540491 SLC6A14Q9UN76 642 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 GON4LQ3T8J9 2241 aa20.3■□□□□ 0.84
SOD2-212ENST00000540491 IRF1P10914 325 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 RALAP11233 206 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 KRT13P13646 458 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 TYRP14679 529 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 GTF2H1P32780 548 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 PTGER3P43115 390 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 ATXN3P54252 364 aaPredicted RBP20.29■□□□□ 0.84
SOD2-212ENST00000540491 CHPFQ8IZ52 775 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 GABRG3Q99928 467 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 FAM49BQ9NUQ9 324 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.29■□□□□ 0.84
SOD2-212ENST00000540491 CLIC5Q9NZA1 410 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 MYOFQ9NZM1 2061 aa20.29■□□□□ 0.84
SOD2-212ENST00000540491 A0A1W2PQF6 199 aa20.28■□□□□ 0.84
SOD2-212ENST00000540491 TMEM8BA6NDV4 472 aa20.28■□□□□ 0.84
SOD2-212ENST00000540491 HHLA1C9JL84 531 aa20.28■□□□□ 0.84
SOD2-212ENST00000540491 NEDD8-MDP1E9PL57 170 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms