RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 EEF2KMTQ96G04 330 aa13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 TMEM176AQ96HP8 235 aa13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 HHIPQ96QV1 700 aa13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 DUSP15Q9H1R2 295 aaPredicted RBP13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 SPHK2Q9NRA0 654 aa13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 CISHQ9NSE2 258 aa13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 CLIC5Q9NZA1 410 aa13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 MARK1Q9P0L2 795 aa13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 SH3BP1Q9Y3L3 701 aa13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 STARD13Q9Y3M8 1113 aa13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 CEP192Q8TEP8 1941 aa13.83□□□□□ -0.2
SEMA4D-223ENST00000540475 SLC30A4O14863 429 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 CLSTN1O94985 981 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 TBX18O95935 607 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 APODP05090 189 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 ZNF806P0C7X5 589 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 CD58P19256 250 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 ACO1P21399 889 aaKnown RBP13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 DGKEP52429 567 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 LIMK1P53667 647 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 CRY1Q16526 586 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 PREPLQ4J6C6 727 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 C2orf27AQ580R0 203 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 SCD5Q86SK9 330 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 TMEM25Q86YD3 366 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 IL17RCQ8NAC3 791 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 OLIG1Q8TAK6 271 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 TATDN2Q93075 761 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 SMARCE1Q969G3 411 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 CNOT6LQ96LI5 555 aaKnown RBP13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 TSG101Q99816 390 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 MMRN2Q9H8L6 949 aa13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.82□□□□□ -0.2
SEMA4D-223ENST00000540475 MED19A0JLT2 244 aaPredicted RBP13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 GOLGA6L4A6NEF3 574 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 SCAMP3O14828 347 aaKnown RBP13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 CYP26A1O43174 497 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 TULP3O75386 442 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 RARGP13631 454 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 HNRNPLP14866 589 aaKnown RBP eCLIP13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 PPP1R2P41236 205 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 PLA2G4AP47712 749 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 TMEM92Q6UXU6 159 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 Q6ZNB5 142 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 C11orf74Q86VG3 221 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 SFTPA1Q8IWL2 248 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 UBR7Q8N806 425 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 ANKRD52Q8NB46 1076 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 SLC35C1Q96A29 364 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 DHTKD1Q96HY7 919 aaPredicted RBP13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 HEXIM2Q96MH2 286 aaKnown RBP13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 ARRDC1-AS1Q9H2J1 176 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 ARHGEF4Q9NR80 690 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 HOOK1Q9UJC3 728 aaKnown RBP13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 DNMT3LQ9UJW3 386 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 CDV3Q9UKY7 258 aaKnown RBP13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 HCN2Q9UL51 889 aa13.81□□□□□ -0.2
SEMA4D-223ENST00000540475 A0A1W2PQH9 124 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 TM4SF5O14894 197 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 CACNG3O60359 315 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 ADAM23O75077 832 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 CCDC192P0DO97 292 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 PM20D1Q6GTS8 502 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 TADA2BQ86TJ2 420 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 TSTD1Q8NFU3 115 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 CEP63Q96MT8 703 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 CDK5RAP1Q96SZ6 601 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 ARID3AQ99856 593 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 NACA2Q9H009 215 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 METTL14Q9HCE5 456 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 WDR35Q9P2L0 1181 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 DEC1Q9P2X7 70 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 ARMCX3Q9UH62 379 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 FBXO10Q9UK96 956 aa13.8□□□□□ -0.2
SEMA4D-223ENST00000540475 TRIM49BA6NDI0 452 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 SGK1O00141 431 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 RHOBTB1O94844 696 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 BMP6P22004 513 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 SEC13P55735 322 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 GOLGA8FQ08AF8 430 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 GOLGA8DPQ0D2H9 430 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 CUL2Q13617 745 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 ZNF394Q53GI3 561 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 USP39Q53GS9 565 aaKnown RBP13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 EOGTQ5NDL2 527 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 EMC10Q5UCC4 262 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 BTBD8Q5XKL5 378 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 PIGZQ86VD9 579 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 TTC30AQ86WT1 665 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 ALLCQ8N6M5 410 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 TERB1Q8NA31 727 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 TXNDC5Q8NBS9 432 aaKnown RBP13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 MDGA1Q8NFP4 955 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 ERCC4Q92889 916 aaPredicted RBP13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 MAN1B1Q9UKM7 699 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 KIAA1257Q9ULG3 409 aa13.79□□□□□ -0.2
SEMA4D-223ENST00000540475 NCOR2Q9Y618 2525 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms