RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ATP2A3Q93084 1043 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 MSANTD3Q96H12 275 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 BPIFA3Q9BQP9 254 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 CLIC5Q9NZA1 410 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 CYTH4Q9UIA0 394 aa19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 ARIH1Q9Y4X5 557 aaPredicted RBP19.22■□□□□ 0.67
SNRPA1-203ENST00000540017 MUC6Q6W4X9 2439 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 E2F8A0AVK6 867 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 LRRC10BA6NIK2 292 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 YJEFN3A6XGL0 299 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 E7ENQ6 273 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 CHRNB1P11230 501 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 UCHL3P15374 230 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 GJA4P35212 333 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 RAPGEF1Q13905 1077 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 DRAP1Q14919 205 aaPredicted RBP19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 GAB4Q2WGN9 574 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 KLHDC10Q6PID8 442 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 FAM71AQ8IYT1 594 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 CPA6Q8N4T0 437 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 CLEC4CQ8WTT0 213 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 GANQ9H2C0 597 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 LMAN1LQ9HAT1 526 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 FBRSL1Q9HCM7 1045 aaKnown RBP19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 RBM12Q9NTZ6 932 aaKnown RBP19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 DNMT3LQ9UJW3 386 aa19.21■□□□□ 0.67
SNRPA1-203ENST00000540017 H0Y858 1186 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 EPHB6O15197 1021 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 RALAP11233 206 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 CDK11BP21127 795 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 RPS9P46781 194 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 RPL34P49207 117 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 ZNF165P49910 485 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 DAOAP59103 153 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 SLC47A2Q86VL8 602 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 BBS7Q8IWZ6 715 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 SIX6OS1Q8N1H7 587 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 SCML4Q8N228 414 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 ARHGAP18Q8N392 663 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 WDTC1Q8N5D0 677 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 KIAA1958Q8N8K9 716 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 HSFY1Q96LI6 401 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 PRRX2Q99811 253 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 NAT10Q9H0A0 1025 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 PLCB1Q9NQ66 1216 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 CNGB3Q9NQW8 809 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 SIK3Q9Y2K2 1263 aa19.2■□□□□ 0.66
SNRPA1-203ENST00000540017 LGALS16A8MUM7 142 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 MED7O43513 233 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 CYP17A1P05093 508 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 EFEMP1Q12805 493 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 IQCB1Q15051 598 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 MEA1Q16626 185 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 BSPRYQ5W0U4 402 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 RHBDF2Q6PJF5 856 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 MIB1Q86YT6 1006 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 EDEM1Q92611 657 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 SH3BP1Q9Y3L3 701 aa19.19■□□□□ 0.66
SNRPA1-203ENST00000540017 TRDMT1O14717 391 aaKnown RBP19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 SLC9A3R1O14745 358 aaPredicted RBP19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 NCAM2O15394 837 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 STC2O76061 302 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 NFATC1O95644 943 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 TPM2P07951 284 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 PTMSP20962 102 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 GALK1P51570 392 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 PTPN5P54829 565 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 PTK2Q05397 1052 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 GAS6Q14393 721 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 ANGPT1Q15389 498 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 DHCR24Q15392 516 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 SYCP1Q15431 976 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 TMEM196Q5HYL7 178 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 FKBP15Q5T1M5 1219 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 BTBD8Q5XKL5 378 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 SMYD5Q6GMV2 418 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 FSTL4Q6MZW2 842 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 C1orf228Q6PIY5 440 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 HTR3DQ70Z44 454 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 C1orf210Q8IVY1 113 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 SCUBE3Q8IX30 993 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 MAML2Q8IZL2 1156 aaPredicted RBP19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 SLC4A5Q9BY07 1137 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 MIS12Q9H081 205 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 ST7Q9NRC1 585 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 FAM207AQ9NSI2 230 aaPredicted RBP19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 TBC1D14Q9P2M4 693 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 TJP2Q9UDY2 1190 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 RASAL2Q9UJF2 1139 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 PCDHGC3Q9UN70 934 aa19.18■□□□□ 0.66
SNRPA1-203ENST00000540017 KLKB1P03952 638 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 HMBSP08397 361 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 OPRD1P41143 372 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 NHLH1Q02575 133 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 UBXN1Q04323 297 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 MTAPQ13126 283 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 CCINQ13939 588 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 Q6ZS52 159 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 TADA2BQ86TJ2 420 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 PASD1Q8IV76 773 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms