RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 PRDM12Q9H4Q4 367 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDX55-206ENST00000539934 KCND2Q9NZV8 630 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 ANAPC5Q9UJX4 755 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 LRCH1Q9Y2L9 728 aa13.08□□□□□ -0.32
DDX55-206ENST00000539934 MAFBQ9Y5Q3 323 aaPredicted RBP13.08□□□□□ -0.32
DDX55-206ENST00000539934 TTC26A0AVF1 554 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 NKRFO15226 690 aaKnown RBP eCLIP13.07□□□□□ -0.32
DDX55-206ENST00000539934 PGK2P07205 417 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 ALOX5P09917 674 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 MYBP10242 640 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 KNOP1Q1ED39 458 aaKnown RBP13.07□□□□□ -0.32
DDX55-206ENST00000539934 FAM171BQ6P995 826 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 TOGARAM2Q6ZUX3 1019 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 GPRASP2Q96D09 838 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 CCDC43Q96MW1 224 aaKnown RBP13.07□□□□□ -0.32
DDX55-206ENST00000539934 MRPL1Q9BYD6 325 aaKnown RBP13.07□□□□□ -0.32
DDX55-206ENST00000539934 UNKQ9C0B0 810 aaKnown RBP13.07□□□□□ -0.32
DDX55-206ENST00000539934 OLFML3Q9NRN5 406 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 KLHL3Q9UH77 587 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 CDC23Q9UJX2 597 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 EDARQ9UNE0 448 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 WDR81Q562E7 1941 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 DOCK5Q9H7D0 1870 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 CENPBD1B2RD01 187 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 B8ZZF3 427 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 INO80B-WBP1J3KQ70 363 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 RNF225M0QZC1 329 aaPredicted RBP13.07□□□□□ -0.32
DDX55-206ENST00000539934 KLHL2O95198 593 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 CLTBP09497 229 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 AXLP30530 894 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 QARSP47897 775 aaKnown RBP13.07□□□□□ -0.32
DDX55-206ENST00000539934 RXRGP48443 463 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 PTDSS1P48651 473 aaKnown RBP13.07□□□□□ -0.32
DDX55-206ENST00000539934 JAK3P52333 1124 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 CACNA2D1P54289 1103 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 DAB2P98082 770 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 KRT76Q01546 638 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 MTF1Q14872 753 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 EDRF1Q3B7T1 1238 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 Q3ZCU0 254 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 TMTC1Q8IUR5 882 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 NUP93Q8N1F7 819 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 NKAIN3Q8N8D7 197 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 CHST13Q8NET6 341 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 CALML6Q8TD86 181 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 FBF1Q8TES7 1133 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
DDX55-206ENST00000539934 RIN2Q8WYP3 895 aaPredicted RBP13.07□□□□□ -0.32
DDX55-206ENST00000539934 DESI2Q9BSY9 194 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 TUT1Q9H6E5 874 aaKnown RBP13.07□□□□□ -0.32
DDX55-206ENST00000539934 PPCSQ9HAB8 311 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 ASIC3Q9UHC3 531 aa13.07□□□□□ -0.32
DDX55-206ENST00000539934 A0A0G2JMZ2 1700 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 LCTP09848 1927 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 WDR64B1ANS9 1081 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 XPOTO43592 962 aaKnown RBP13.06□□□□□ -0.32
DDX55-206ENST00000539934 CALUO43852 315 aaPredicted RBP13.06□□□□□ -0.32
DDX55-206ENST00000539934 IGFBP4P22692 258 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 NR2F2P24468 414 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 CRABP2P29373 138 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 SFNP31947 248 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 GNALP38405 381 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 KLK7P49862 253 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 GALK1P51570 392 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 ALDH18A1P54886 795 aaKnown RBP13.06□□□□□ -0.32
DDX55-206ENST00000539934 PFKPQ01813 784 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 PLCB3Q01970 1234 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 INO80DQ53TQ3 878 aaPredicted RBP13.06□□□□□ -0.32
DDX55-206ENST00000539934 CYP4A22Q5TCH4 519 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 LRRC8BQ6P9F7 803 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 C4orf22Q6V702 233 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 LBX2Q6XYB7 198 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 TRIM67Q6ZTA4 783 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 CYP4V2Q6ZWL3 525 aaPredicted RBP13.06□□□□□ -0.32
DDX55-206ENST00000539934 EPM2AIP1Q7L775 607 aaPredicted RBP13.06□□□□□ -0.32
DDX55-206ENST00000539934 GATAD2AQ86YP4 633 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 PASD1Q8IV76 773 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 ANKRD35Q8N283 1001 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 TTLQ8NG68 377 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 ARL8AQ96BM9 186 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 NLRP4Q96MN2 994 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 ERGIC2Q96RQ1 377 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 HPS4Q9NQG7 708 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 XPNPEP3Q9NQH7 507 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 STARD7Q9NQZ5 370 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 TMEM39AQ9NV64 488 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 EPS15L1Q9UBC2 864 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 KCNN3Q9UGI6 736 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 CAPN11Q9UMQ6 739 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 PLAAQ9Y263 795 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 EPN1Q9Y6I3 576 aaPredicted RBP13.06□□□□□ -0.32
DDX55-206ENST00000539934 USH1CQ9Y6N9 552 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 TRANK1O15050 2925 aa13.06□□□□□ -0.32
DDX55-206ENST00000539934 TRDMT1O14717 391 aaKnown RBP13.05□□□□□ -0.32
DDX55-206ENST00000539934 ECDO95905 644 aaPredicted RBP13.05□□□□□ -0.32
DDX55-206ENST00000539934 IGHA2P01877 340 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 CYP17A1P05093 508 aa13.05□□□□□ -0.32
DDX55-206ENST00000539934 PABPC1P11940 636 aaKnown RBP13.05□□□□□ -0.32
DDX55-206ENST00000539934 PHBP35232 272 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms