RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 POPDC2Q9HBU9 364 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 PCDH18Q9HCL0 1135 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
SPARC-209ENST00000539687 RNF186Q9NXI6 227 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 FETUBQ9UGM5 382 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 NOVA2Q9UNW9 492 aaKnown RBP10.6□□□□□ -0.71
SPARC-209ENST00000539687 NME7Q9Y5B8 376 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 RAD54BQ9Y620 910 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 BCLAF3A2AJT9 711 aaKnown RBP10.59□□□□□ -0.71
SPARC-209ENST00000539687 C9IYK1 514 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 CDH16O75309 829 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 STK10O94804 968 aaKnown RBP10.59□□□□□ -0.71
SPARC-209ENST00000539687 IFNB1P01574 187 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 GHRP10912 638 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 CD52P31358 61 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 MAGEA4P43358 317 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 VPS41P49754 854 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 SULT1E1P49888 294 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 SCNN1GP51170 649 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 CLCNKBP51801 687 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 HDAC4P56524 1084 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 DYNLT1P63172 113 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 TSPY1Q01534 308 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 ADIGQ0VDE8 80 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 BFSP2Q13515 415 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 TRIP13Q15645 432 aaPredicted RBP10.59□□□□□ -0.71
SPARC-209ENST00000539687 HIF1AQ16665 826 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 TRIM71Q2Q1W2 868 aaKnown RBP10.59□□□□□ -0.71
SPARC-209ENST00000539687 C15orf59Q2T9L4 293 aaPredicted RBP10.59□□□□□ -0.71
SPARC-209ENST00000539687 ARL13BQ3SXY8 428 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 ANKRD20A8PQ5CZ79 823 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 MDH1BQ5I0G3 518 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 DARS2Q6PI48 645 aaKnown RBP10.59□□□□□ -0.71
SPARC-209ENST00000539687 GLB1LQ6UWU2 654 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 ANKS1BQ7Z6G8 1248 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 FAM35AQ86V20 835 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 OSTM1Q86WC4 334 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 ECHDC2Q86YB7 292 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 PDIK1LQ8N165 341 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 OR2W6PQ8NHA6 318 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 PPP1R13LQ8WUF5 828 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 NTAN1Q96AB6 310 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 FAM149B1Q96BN6 582 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 RTP4Q96DX8 246 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 SLC2A13Q96QE2 648 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 PEBP4Q96S96 227 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 ADAM2Q99965 735 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 SNRNP25Q9BV90 132 aaKnown RBP10.59□□□□□ -0.71
SPARC-209ENST00000539687 AGO3Q9H9G7 860 aaKnown RBP10.59□□□□□ -0.71
SPARC-209ENST00000539687 RGS18Q9NS28 235 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 KRT82Q9NSB4 513 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 SENP1Q9P0U3 644 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 ACTL7BQ9Y614 415 aa10.59□□□□□ -0.71
SPARC-209ENST00000539687 KBTBD13C9JR72 458 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 E7EVH7 732 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 H7C0C1 242 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 TMEM189-UBE2V1I3L0A0 370 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 M0QZQ0 153 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 TULP2O00295 520 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 CAPN9O14815 690 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 ALOX15BO15296 676 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 CHADO15335 359 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 TP73O15350 636 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 TRAPPC3O43617 180 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 GRAP2O75791 330 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 AP1G2O75843 785 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 B3GAT3O94766 335 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 ZBED1O96006 694 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 ELNP15502 786 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 ATP5OP48047 213 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 MAGOHP61326 146 aaKnown RBP10.58□□□□□ -0.72
SPARC-209ENST00000539687 INTS6LQ5JSJ4 861 aaKnown RBP10.58□□□□□ -0.72
SPARC-209ENST00000539687 EFHC2Q5JST6 749 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 TRNP1Q6NT89 227 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 C4orf50Q6ZRC1 276 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 CLEC20AQ6ZU45 233 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 MICALCLQ6ZW33 695 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 CYP4V2Q6ZWL3 525 aaPredicted RBP10.58□□□□□ -0.72
SPARC-209ENST00000539687 SLC24A5Q71RS6 500 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 B4GALNT4Q76KP1 1039 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 TDRPQ86YL5 185 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 SH2D3CQ8N5H7 860 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 ATP11CQ8NB49 1132 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 SLC43A3Q8NBI5 491 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 PRCCQ92733 491 aaPredicted RBP10.58□□□□□ -0.72
SPARC-209ENST00000539687 KHSRPQ92945 711 aaKnown RBP eCLIP10.58□□□□□ -0.72
SPARC-209ENST00000539687 WNT8BQ93098 351 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 NT5C3BQ969T7 300 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 ACSF2Q96CM8 615 aaPredicted RBP10.58□□□□□ -0.72
SPARC-209ENST00000539687 PGAP3Q96FM1 320 aaPredicted RBP10.58□□□□□ -0.72
SPARC-209ENST00000539687 ZIC5Q96T25 663 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 NPY6RQ99463 290 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 TMEM121Q9BTD3 319 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 KLC2Q9H0B6 622 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 ELAC1Q9H777 363 aaKnown RBP10.58□□□□□ -0.72
SPARC-209ENST00000539687 CSNK1G1Q9HCP0 422 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 STARD7Q9NQZ5 370 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 AAASQ9NRG9 546 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 SAGE1Q9NXZ1 904 aa10.58□□□□□ -0.72
SPARC-209ENST00000539687 NINJ2Q9NZG7 142 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms