RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 POFUT1Q9H488 388 aa4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 PRDM13Q9H4Q3 707 aa4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 KCND1Q9NSA2 647 aa4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 CPSF2Q9P2I0 782 aaKnown RBP4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 RPS6KA6Q9UK32 745 aa4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 COG5Q9UP83 839 aa4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 RWDD3Q9Y3V2 267 aa4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 TESMINQ9Y4I5 508 aa4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 PCDHGB5Q9Y5G0 923 aa4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 CFAP20Q9Y6A4 193 aaKnown RBP4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 XIRP2A4UGR9 3374 aa4.15□□□□□ -1.75
AC055720.1-201ENST00000539552 ANKRD17O75179 2603 aaKnown RBP4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 NCOR1O75376 2440 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 KIF27Q86VH2 1401 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SYNJ2BP-COX16A0A087WUM0 186 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 A0A1W2PPL8 197 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 LRRC14BA6NHZ5 514 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 AQP12BA6NM10 295 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 NT5C1B-RDH14C9J2C7 533 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SRGAP2O75044 1071 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC22A3O75751 556 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 TSPAN9O75954 239 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 PRPF6O94906 941 aaKnown RBP4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 ZNF202O95125 648 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 PGM3O95394 542 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 BRAFP15056 766 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 CST5P28325 142 aaPredicted RBP4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC7A1P30825 629 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 WASP42768 502 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 CCR9P51686 369 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 NANOS3P60323 173 aaKnown RBP4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 HERVK_113P62684 666 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 RBP5P82980 135 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 HTRA4P83105 476 aaPredicted RBP4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 PPARDQ03181 441 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 LRRC74AQ0VAA2 488 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 TFCP2Q12800 502 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 BFSP1Q12934 665 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 TMED1Q13445 227 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 C3orf36Q3SXR2 165 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 MAP3K21Q5TCX8 1036 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SNX30Q5VWJ9 437 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SULT6B1Q6IMI4 303 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 C11orf88Q6PI97 169 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 CD300LDQ6UXZ3 194 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 ETV3LQ6ZN32 361 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 BEND5Q7L4P6 421 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 NLRP10Q86W26 655 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 NBPF5PQ86XG9 351 aaPredicted RBP4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC44A2Q8IWA5 706 aaPredicted RBP4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 CCDC170Q8IYT3 715 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 LRRC71Q8N4P6 559 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 STYXQ8WUJ0 223 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 TAF4BQ92750 862 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 C16orf92Q96LL3 132 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 MOGAT1Q96PD6 335 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 CRAMP1Q96RY5 1269 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 PIGSQ96S52 555 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 C7orf25Q9BPX7 421 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SLX1AQ9BQ83 275 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 GORASP1Q9BQQ3 440 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 HGH1Q9BTY7 390 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 MYL10Q9BUA6 226 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 MXD3Q9BW11 206 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 TRIM6Q9C030 488 aaPredicted RBP4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SYNCQ9H7C4 482 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 ACAD9Q9H845 621 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 L2HGDHQ9H9P8 463 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 TMEM8AQ9HCN3 771 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SERHLQ9NQF3 203 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 RXFP3Q9NSD7 469 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 MYOTQ9UBF9 498 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 EIF2B4Q9UI10 523 aaKnown RBP4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 FBXL7Q9UJT9 491 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 SMC3Q9UQE7 1217 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 TMEM5Q9Y2B1 443 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 PCDHB4Q9Y5E5 795 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 NUMBLQ9Y6R0 609 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 CEP152O94986 1710 aa4.14□□□□□ -1.75
AC055720.1-201ENST00000539552 TEP1Q99973 2627 aaKnown RBP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 PIK3C2AO00443 1686 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 PRSS38A1L453 326 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 FAM171A2A8MVW0 826 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 PODXLO00592 558 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 UBE2CO00762 179 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 AP3D1O14617 1153 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 NDC80O14777 642 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC27A2O14975 620 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 AKR1B10O60218 316 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 ZNF623O75123 536 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 ERAL1O75616 437 aaKnown RBP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 QDPRP09417 244 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 CSF1P09603 554 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 HNRNPA1P09651 372 aaKnown RBP eCLIP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 CSH1P0DML2 217 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 CSH2P0DML3 217 aa4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 EEF2P13639 858 aaKnown RBP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 ANP32AP39687 249 aaKnown RBP4.13□□□□□ -1.75
AC055720.1-201ENST00000539552 NNMTP40261 264 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms