RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CFAP57Q96MR6 1250 aa14.81□□□□□ -0.04
CD4-208ENST00000538827 FBXO44Q9H4M3 255 aa14.81□□□□□ -0.04
CD4-208ENST00000538827 RRAGDQ9NQL2 400 aaPredicted RBP14.81□□□□□ -0.04
CD4-208ENST00000538827 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.81□□□□□ -0.04
CD4-208ENST00000538827 GMIPQ9P107 970 aa14.81□□□□□ -0.04
CD4-208ENST00000538827 LCMT1Q9UIC8 334 aa14.81□□□□□ -0.04
CD4-208ENST00000538827 FBXW11Q9UKB1 542 aa14.81□□□□□ -0.04
CD4-208ENST00000538827 AMFRQ9UKV5 643 aa14.81□□□□□ -0.04
CD4-208ENST00000538827 IRAK3Q9Y616 596 aa14.81□□□□□ -0.04
CD4-208ENST00000538827 YJEFN3A6XGL0 299 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 E7ENQ6 273 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 RFXAPO00287 272 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 LRG1P02750 347 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 ATP1A1P05023 1023 aaKnown RBP14.8□□□□□ -0.04
CD4-208ENST00000538827 PDGFRAP16234 1089 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 COMTP21964 271 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 YWHAQP27348 245 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 YWHAGP61981 247 aaKnown RBP eCLIP14.8□□□□□ -0.04
CD4-208ENST00000538827 USP46P62068 366 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 DAB2IPQ5VWQ8 1189 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 PDE12Q6L8Q7 609 aaKnown RBP14.8□□□□□ -0.04
CD4-208ENST00000538827 TRNP1Q6NT89 227 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 CCDC149Q6ZUS6 474 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 DEFB106AQ8N104 65 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 KREMEN2Q8NCW0 462 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 LMAN2LQ9H0V9 348 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 ASNSD1Q9NWL6 643 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 HSFX1Q9UBD0 423 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 TMEM59LQ9UK28 342 aa14.8□□□□□ -0.04
CD4-208ENST00000538827 SYNJ2BP-COX16A0A087WUM0 186 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 A0A1W2PQH9 124 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 C2CD4BA6NLJ0 364 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 DPYSL4O14531 572 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 CLASP2O75122 1294 aaKnown RBP14.79□□□□□ -0.04
CD4-208ENST00000538827 OBSL1O75147 1896 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 TUBB4AP04350 444 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 C8AP07357 584 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 GLI1P08151 1106 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 ALADP13716 330 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 EPHB3P54753 998 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 ATP11AP98196 1134 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 CAMK1Q14012 370 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 PIGHQ14442 188 aaPredicted RBP14.79□□□□□ -0.04
CD4-208ENST00000538827 C15orf59Q2T9L4 293 aaPredicted RBP14.79□□□□□ -0.04
CD4-208ENST00000538827 PPM1LQ5SGD2 360 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 BTBD8Q5XKL5 378 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 BHLHA9Q7RTU4 235 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 ADGRD2Q7Z7M1 963 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 RBM23Q86U06 439 aaKnown RBP14.79□□□□□ -0.04
CD4-208ENST00000538827 NT5DC3Q86UY8 548 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 TCEAL8Q8IYN2 117 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 SCML4Q8N228 414 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 KIF18AQ8NI77 898 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 EDEM1Q92611 657 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 PSMB7Q99436 277 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 FAM204AQ9H8W3 233 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 POPDC2Q9HBU9 364 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 MAN1C1Q9NR34 630 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 COX16Q9P0S2 106 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 MAFFQ9ULX9 164 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 STAP1Q9ULZ2 295 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 USP3Q9Y6I4 520 aa14.79□□□□□ -0.04
CD4-208ENST00000538827 PER2O15055 1255 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 FANCGO15287 622 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 RNF8O76064 485 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 CSH1P0DML2 217 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 CSH2P0DML3 217 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 NCAM1P13591 858 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 EPCAMP16422 314 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 MAN1A1P33908 653 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 SLC1A1P43005 524 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 CLCN4P51793 760 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 ZNF143P52747 638 aaPredicted RBP14.78□□□□□ -0.04
CD4-208ENST00000538827 YWHAZP63104 245 aaKnown RBP14.78□□□□□ -0.04
CD4-208ENST00000538827 FOXK2Q01167 660 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 RPS6KA1Q15418 735 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 DCAF6Q58WW2 860 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 ZFYVE27Q5T4F4 411 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 MEI1Q5TIA1 1274 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 PM20D1Q6GTS8 502 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 SLFN11Q7Z7L1 901 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 ELMOD1Q8N336 334 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 ARHGAP18Q8N392 663 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 FNIP1Q8TF40 1166 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 FAM172AQ8WUF8 416 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 SLITRK1Q96PX8 696 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 SLC2A13Q96QE2 648 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 CNPY3Q9BT09 278 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 TRIM62Q9BVG3 475 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 NMUR1Q9HB89 426 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 COMMD8Q9NX08 183 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 EHD2Q9NZN4 543 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 NAALADL1Q9UQQ1 740 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 SCML2Q9UQR0 700 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 JRKLQ9Y4A0 524 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 ALG6Q9Y672 507 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 CACNA1AO00555 2505 aa14.78□□□□□ -0.04
CD4-208ENST00000538827 CCL16O15467 120 aa14.77□□□□□ -0.05
CD4-208ENST00000538827 URI1O94763 535 aaPredicted RBP14.77□□□□□ -0.05
CD4-208ENST00000538827 MATKP42679 507 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms