RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 RNF25Q96BH1 459 aaPredicted RBP20.37■□□□□ 0.85
EFCAB11-202ENST00000538485 NR2E3Q9Y5X4 410 aa20.37■□□□□ 0.85
EFCAB11-202ENST00000538485 ZNF638Q14966 1978 aaKnown RBP20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 PRPSAP2O60256 369 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 ARHGEF15O94989 841 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 RARAP10276 462 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 ATF6P18850 670 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 CTNNB1P35222 781 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 SULT1E1P49888 294 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 RAB33AQ14088 237 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 SMC1AQ14683 1233 aaKnown RBP20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 STRADAQ7RTN6 431 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 BNIPLQ7Z465 357 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 SLC13A5Q86YT5 568 aaPredicted RBP20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 CCDC50Q8IVM0 306 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 ZDHHC14Q8IZN3 488 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 UBXN4Q92575 508 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 SPATA17Q96L03 361 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 HERPUD2Q9BSE4 406 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 ALG13Q9NP73 1137 aaKnown RBP20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 DDX56Q9NY93 547 aaKnown RBP20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 IL37Q9NZH6 218 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 STAP1Q9ULZ2 295 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 GREB1Q4ZG55 1949 aa20.36■□□□□ 0.85
EFCAB11-202ENST00000538485 MYO16Q9Y6X6 1858 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 COL4A4P53420 1690 aaPredicted RBP20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 TCRBV7S2A1N4TA0A589 114 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 KRIT1O00522 736 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 TEX28O15482 410 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 SEC24AO95486 1093 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 KRT1P04264 644 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 TPGS2Q68CL5 300 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 SCD5Q86SK9 330 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 GPR65Q8IYL9 337 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 RCOR2Q8IZ40 523 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 NAP1L3Q99457 506 aaPredicted RBP20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 C17orf80Q9BSJ5 609 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 FBXO44Q9H4M3 255 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 SCML2Q9UQR0 700 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 TNRC18O15417 2968 aaPredicted RBP20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 LRRD1A4D1F6 860 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 M0QYT0 321 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 ENDOD1O94919 500 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 YWHAGP61981 247 aaKnown RBP eCLIP20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 RPL10AP62906 217 aaKnown RBP20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 MTMR3Q13615 1198 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 MFSD7Q6UXD7 560 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 CMASQ8NFW8 434 aaPredicted RBP20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 ADAM32Q8TC27 787 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 HSPH1Q92598 858 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 SLITRK1Q96PX8 696 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 FNIP2Q9P278 1114 aa20.35■□□□□ 0.85
EFCAB11-202ENST00000538485 FAM92AA1XBS5 289 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 C3orf70A6NLC5 250 aaPredicted RBP20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 RALAP11233 206 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 TUFMP49411 452 aaKnown RBP20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 TMC7Q7Z402 723 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 SLC7A14Q8TBB6 771 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 GIPC2Q8TF65 315 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 RBM41Q96IZ5 413 aaKnown RBP20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 NCAPGQ9BPX3 1015 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 HEMGNQ9BXL5 484 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 OSBPL8Q9BZF1 889 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 EPC1Q9H2F5 836 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 NMUR1Q9HB89 426 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 RXFP1Q9HBX9 757 aa20.34■□□□□ 0.85
EFCAB11-202ENST00000538485 SYNJ2BP-COX16A0A087WUM0 186 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 FSCN2O14926 492 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 CD48P09326 243 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 CNPP09543 421 aaKnown RBP20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 ELF2Q15723 593 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 CLUL1Q15846 466 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 BOLA3Q53S33 107 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 ODF2Q5BJF6 829 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 MON1AQ86VX9 555 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 CYP4F11Q9HBI6 524 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 PIGVQ9NUD9 493 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 OSER1Q9NX31 292 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 COX16Q9P0S2 106 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 HSFX1Q9UBD0 423 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 MTUS1Q9ULD2 1270 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 PLXNA3P51805 1871 aa20.33■□□□□ 0.85
EFCAB11-202ENST00000538485 GBF1Q92538 1859 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 A0A1W2PQH9 124 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 KDELR1P24390 212 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 YWHAQP27348 245 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 CA8P35219 290 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 CDKN2BP42772 138 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 ERVFC1P60507 584 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 NME3Q13232 169 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 SPOCD1Q6ZMY3 1216 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 BEND5Q7L4P6 421 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 FAM131BQ86XD5 332 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 MMGT1Q8N4V1 131 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 ABCC13Q9NSE7 274 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 SSX2IPQ9Y2D8 614 aa20.33■□□□□ 0.84
EFCAB11-202ENST00000538485 RTN3O95197 1032 aaPredicted RBP20.32■□□□□ 0.84
EFCAB11-202ENST00000538485 CXCL14O95715 111 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms