RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SNTG2Q9NY99 539 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 SCNN1BP51168 640 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 TAS1R2Q8TE23 839 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 RXFP2Q8WXD0 754 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 SOCS4Q8WXH5 440 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 GFM2Q969S9 779 aaKnown RBP17.33■□□□□ 0.36
SCARB1-205ENST00000538291 KIAA1683Q9H0B3 1180 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 RAD54BQ9Y620 910 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 M0R3G1 203 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 PSMA4P25789 261 aaKnown RBP17.33■□□□□ 0.36
SCARB1-205ENST00000538291 RRM2P31350 389 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 NUDT2P50583 147 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 SUGP1Q8IWZ8 645 aaKnown RBP17.33■□□□□ 0.36
SCARB1-205ENST00000538291 DNAJB3Q8WWF6 145 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 ZMAT2Q96NC0 199 aaKnown RBP17.33■□□□□ 0.36
SCARB1-205ENST00000538291 RRN3Q9NYV6 651 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 TMCC3Q9ULS5 477 aa17.33■□□□□ 0.36
SCARB1-205ENST00000538291 CAB39Q9Y376 341 aaPredicted RBP17.33■□□□□ 0.36
SCARB1-205ENST00000538291 MRPS15P82914 257 aaKnown RBP17.32■□□□□ 0.36
SCARB1-205ENST00000538291 MYBPC2Q14324 1141 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 ILDR2Q71H61 639 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 MICU2Q8IYU8 434 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 ATG4AQ8WYN0 398 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 POP1Q99575 1024 aaKnown RBP17.32■□□□□ 0.36
SCARB1-205ENST00000538291 VTA1Q9NP79 307 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 AGLP35573 1532 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 GNG14A0A1W2PPG7 69 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 DDNO94850 711 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-205ENST00000538291 AMHP03971 560 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-205ENST00000538291 SGCGQ13326 291 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 PGM5Q15124 567 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 FUT11Q495W5 492 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 PREPLQ4J6C6 727 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-205ENST00000538291 DAB2IPQ5VWQ8 1189 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-205ENST00000538291 MAGEB10Q96LZ2 347 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-205ENST00000538291 XPNPEP3Q9NQH7 507 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 IRAK1BP1Q5VVH5 260 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 SPOCD1Q6ZMY3 1216 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 CCDC33Q8N5R6 958 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 CASP10Q92851 521 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 KCNB2Q92953 911 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 APOL2Q9BQE5 337 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 ABHD16BQ9H3Z7 469 aa17.32■□□□□ 0.36
SCARB1-205ENST00000538291 RRM1P23921 792 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 MARC1Q5VT66 337 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 CAPRIN2Q6IMN6 1127 aaKnown RBP17.31■□□□□ 0.36
SCARB1-205ENST00000538291 MTSS1LQ765P7 747 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.31■□□□□ 0.36
SCARB1-205ENST00000538291 TAF6LQ9Y6J9 622 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 XYLBO75191 536 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 PROSCO94903 275 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 SERPINF2P08697 491 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 LSP1P33241 339 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 KRT20P35900 424 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 HALP42357 657 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 LY6KQ17RY6 165 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 ICE2Q659A1 982 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 NLRP9Q7RTR0 991 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 RRAGCQ9HB90 399 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
SCARB1-205ENST00000538291 ACOT9Q9Y305 439 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 IFNA14P01570 189 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 PCNAP12004 261 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 CNTFP26441 200 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 TBX4P57082 545 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 PLIN5Q00G26 463 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 SLC27A1Q6PCB7 646 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 EXD1Q8NHP7 514 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 KCNF1Q9H3M0 494 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 ELOVL6Q9H5J4 265 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 GPAMQ9HCL2 828 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.31■□□□□ 0.36
SCARB1-205ENST00000538291 BARX2Q9UMQ3 279 aaPredicted RBP17.31■□□□□ 0.36
SCARB1-205ENST00000538291 DNAJC3Q13217 504 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 MFSD10Q14728 455 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 PTPAQ15257 358 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 STRA8Q7Z7C7 330 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 CYP4Z1Q86W10 505 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 RBM22Q9NW64 420 aaKnown RBP eCLIP17.31■□□□□ 0.362e-16■■■■■ 75.9
SCARB1-205ENST00000538291 PSMD12O00232 456 aaPredicted RBP17.31■□□□□ 0.36
SCARB1-205ENST00000538291 PLEKP08567 350 aaPredicted RBP17.31■□□□□ 0.36
SCARB1-205ENST00000538291 THRAP10827 490 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 FAM171A1Q5VUB5 890 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 CCDC60Q8IWA6 550 aaPredicted RBP17.31■□□□□ 0.36
SCARB1-205ENST00000538291 PABPC3Q9H361 631 aaKnown RBP17.31■□□□□ 0.36
SCARB1-205ENST00000538291 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 KRT84Q9NSB2 600 aa17.31■□□□□ 0.36
SCARB1-205ENST00000538291 NDUFB5O43674 189 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 GHRP10912 638 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 MSH3P20585 1137 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 AXLP30530 894 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 CPA2P48052 419 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 GLRBP48167 497 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 LPCAT1Q8NF37 534 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 REPS2Q8NFH8 660 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 FAM136AQ96C01 138 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 GANQ9H2C0 597 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 CYP39A1Q9NYL5 469 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms