RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 BHMG1C9JSJ3 638 aaPredicted RBP15.8■□□□□ 0.12
PXN-208ENST00000538144 CAPN9O14815 690 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 SART1O43290 800 aaKnown RBP15.8■□□□□ 0.12
PXN-208ENST00000538144 LTFP02788 710 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 URODP06132 367 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 FYNP06241 537 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 KRT7P08729 469 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 NOS2P35228 1153 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 SULT1E1P49888 294 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 ATXN1P54253 815 aaKnown RBP15.8■□□□□ 0.12
PXN-208ENST00000538144 HDAC4P56524 1084 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 KRT17Q04695 432 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 SMARCB1Q12824 385 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 ODF2Q5BJF6 829 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 BHLHA9Q7RTU4 235 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 POLNQ7Z5Q5 900 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 NUP93Q8N1F7 819 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 HDAC7Q8WUI4 952 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 RAPGEF5Q92565 580 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 TBCBQ99426 244 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 C11orf84Q9BUA3 381 aaPredicted RBP15.8■□□□□ 0.12
PXN-208ENST00000538144 PLXNA4Q9HCM2 1894 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 DDX56Q9NY93 547 aaKnown RBP15.8■□□□□ 0.12
PXN-208ENST00000538144 CALCOCO1Q9P1Z2 691 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 NR2E1Q9Y466 385 aa15.8■□□□□ 0.12
PXN-208ENST00000538144 ZNF638Q14966 1978 aaKnown RBP15.79■□□□□ 0.12
PXN-208ENST00000538144 TCRBV7S2A1N4TA0A589 114 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 PRPSAP2O60256 369 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 RARAP10276 462 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 NCAM1P13591 858 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 PITX1P78337 314 aaPredicted RBP15.79■□□□□ 0.12
PXN-208ENST00000538144 SLC25A52Q3SY17 297 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 ANKS1BQ7Z6G8 1248 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 SLC13A5Q86YT5 568 aaPredicted RBP15.79■□□□□ 0.12
PXN-208ENST00000538144 RCOR2Q8IZ40 523 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 KLHL23Q8NBE8 558 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 C2orf15Q8WU43 125 aaKnown RBP15.79■□□□□ 0.12
PXN-208ENST00000538144 IRGQQ8WZA9 623 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 HSPH1Q92598 858 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 EDEM1Q92611 657 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 CENPIQ92674 756 aaPredicted RBP15.79■□□□□ 0.12
PXN-208ENST00000538144 CLP1Q92989 425 aaKnown RBP15.79■□□□□ 0.12
PXN-208ENST00000538144 SLC2A13Q96QE2 648 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 NAP1L3Q99457 506 aaPredicted RBP15.79■□□□□ 0.12
PXN-208ENST00000538144 HEMGNQ9BXL5 484 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 MTIF3Q9H2K0 278 aaKnown RBP15.79■□□□□ 0.12
PXN-208ENST00000538144 HPCAL4Q9UM19 191 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 GREB1Q4ZG55 1949 aa15.79■□□□□ 0.12
PXN-208ENST00000538144 SYNJ2BP-COX16A0A087WUM0 186 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 LRRD1A4D1F6 860 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 HAPLN1P10915 354 aaPredicted RBP15.78■□□□□ 0.12
PXN-208ENST00000538144 MRPS25P82663 173 aaKnown RBP15.78■□□□□ 0.12
PXN-208ENST00000538144 BSPRYQ5W0U4 402 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 MFSD7Q6UXD7 560 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 CYP4V2Q6ZWL3 525 aaPredicted RBP15.78■□□□□ 0.12
PXN-208ENST00000538144 KLHL7Q8IXQ5 586 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 SCML4Q8N228 414 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 RBM41Q96IZ5 413 aaKnown RBP15.78■□□□□ 0.12
PXN-208ENST00000538144 SLITRK1Q96PX8 696 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 HERPUD2Q9BSE4 406 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 COX16Q9P0S2 106 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 STIM2Q9P246 746 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 STAP1Q9ULZ2 295 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 M0QYT0 321 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 RALAP11233 206 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 CA8P35219 290 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 USP46P62068 366 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 CLUL1Q15846 466 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 C9orf50Q5SZB4 431 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 ZDHHC14Q8IZN3 488 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 SP7Q8TDD2 431 aaPredicted RBP15.78■□□□□ 0.12
PXN-208ENST00000538144 NT5C3BQ969T7 300 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 KRT12Q99456 494 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 NPY6RQ99463 290 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 GDF3Q9NR23 364 aa15.78■□□□□ 0.12
PXN-208ENST00000538144 MRPL17Q9NRX2 175 aaKnown RBP15.78■□□□□ 0.12
PXN-208ENST00000538144 KRT10P13645 584 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 KDELR1P24390 212 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 CETN2P41208 172 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 PGFP49763 221 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 NME3Q13232 169 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 RASIP1Q5U651 963 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 OTUD1Q5VV17 481 aaPredicted RBP15.77■□□□□ 0.11
PXN-208ENST00000538144 KAZNQ674X7 775 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 SPOCD1Q6ZMY3 1216 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 DENND5BQ6ZUT9 1274 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 STRADAQ7RTN6 431 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 KCTD6Q8NC69 237 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 ZNF461Q8TAF7 563 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 SLC7A14Q8TBB6 771 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 ADAM32Q8TC27 787 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 GIPC2Q8TF65 315 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 NCAPGQ9BPX3 1015 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 OSBPL8Q9BZF1 889 aa15.77■□□□□ 0.11
PXN-208ENST00000538144 DDX47Q9H0S4 455 aaKnown RBP15.77■□□□□ 0.11
PXN-208ENST00000538144 LAMA2P24043 3122 aaKnown RBP15.76■□□□□ 0.11
PXN-208ENST00000538144 GRXCR1A8MXD5 290 aa15.76■□□□□ 0.11
PXN-208ENST00000538144 CCDC188H7C350 402 aa15.76■□□□□ 0.11
PXN-208ENST00000538144 FSCN2O14926 492 aa15.76■□□□□ 0.11
PXN-208ENST00000538144 ZMYND10O75800 440 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms