RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ING3Q9NXR8 418 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 PKP3Q9Y446 797 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 MYMKA6NI61 221 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 SLC16A4O15374 487 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 DYNLL1P63167 89 aaKnown RBP5.84□□□□□ -1.48
CSMD1-215ENST00000537824 ENOSF1Q7L5Y1 443 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 RTKN2Q8IZC4 609 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 LRRC17Q8N6Y2 441 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 SPATA16Q9BXB7 569 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 TRIM9Q9C026 710 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 PREBQ9HCU5 417 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 GRID1Q9ULK0 1009 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 TMCC3Q9ULS5 477 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 CYP2D6P10635 497 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 AKAP5P24588 427 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 VAC14Q08AM6 782 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 LDLRAP1Q5SW96 308 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SYDE2Q5VT97 1194 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SLCO6A1Q86UG4 719 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ANKRD49Q8WVL7 239 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 CEP170P1Q96L14 293 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PNMA8BQ9ULN7 279 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 DMTF1Q9Y222 760 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PPP2R3BQ9Y5P8 575 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 CYP19A1P11511 503 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ALADP13716 330 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SKIV2L2P42285 1042 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 RHAGQ02094 409 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 KRT33BQ14525 404 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ABCB5Q2M3G0 1257 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 CERKLQ49MI3 558 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ERMARDQ5T6L9 678 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SYTL5Q8TDW5 730 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PLEKHA5Q9HAU0 1116 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 DYRK4Q9NR20 520 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SLC9A8Q9Y2E8 581 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 TBXAS1P24557 533 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 AVPR1AP37288 418 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 CENPAP49450 140 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 MIS18BP1Q6P0N0 1132 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PADI6Q6TGC4 694 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 KDELC2Q7Z4H8 507 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 RNF148Q8N7C7 305 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 RNASE11Q8TAA1 199 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 NAALADL1Q9UQQ1 740 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 MTSS1O43312 755 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 TMCC2O75069 709 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 GRAP2O75791 330 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 NPTXRO95502 500 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PROCP04070 461 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 STARP49675 285 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ERVK-9P63128 1117 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 FAM98BQ52LJ0 330 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SAMD4BQ5PRF9 694 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 FAXCQ5TGI0 409 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 CDC73Q6P1J9 531 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 WDR36Q8NI36 951 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ASB12Q8WXK4 309 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF669Q96BR6 464 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 DNAJC1Q96KC8 554 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ZSWIM1Q9BR11 485 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 RABL2BQ9UNT1 228 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 CDC40O60508 579 aaKnown RBP eCLIP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 OCLNQ16625 522 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PDCD4Q53EL6 469 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 IQSEC1Q6DN90 963 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 IZUMO1Q8IYV9 350 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 GALNT15Q8N3T1 639 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 DPP10Q8N608 796 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SHCBP1Q8NEM2 672 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 IPMKQ8NFU5 416 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 KIAA1217Q5T5P2 1943 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 MLH3Q9UHC1 1453 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 DYSFO75923 2080 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 A0A1W2PQJ5 194 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 IL2RBP14784 551 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 GRK3P35626 688 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SLC1A6P48664 564 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 RTP1P59025 263 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 C1DQ13901 141 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 EFR3AQ14156 821 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PDPK2PQ6A1A2 396 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PPP1R10Q96QC0 940 aaKnown RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 FAM213AQ9BRX8 229 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ANKARQ7Z5J8 1434 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SAGE2PA6NJ88 616 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 PLOD3O60568 738 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ASMTLO95671 621 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 UCHL3P15374 230 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 CCND2P30279 289 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ADSLP30566 484 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 GUCY1A2P33402 732 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 ITGA1P56199 1179 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 RAB43Q86YS6 212 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 SFRP1Q8N474 314 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 DRAXINQ8NBI3 349 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 FIG4Q92562 907 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 NUDT12Q9BQG2 462 aa5.83□□□□□ -1.48
CSMD1-215ENST00000537824 MTG1Q9BT17 334 aaPredicted RBP5.83□□□□□ -1.48
CSMD1-215ENST00000537824 TCF7L2Q9NQB0 619 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms