RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 KLHL38Q2WGJ6 581 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 BBS9Q3SYG4 887 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 MSS51Q4VC12 460 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 PPP6R3Q5H9R7 873 aaPredicted RBP16.3■□□□□ 0.2
MKS1-204ENST00000537529 PIGWQ7Z7B1 504 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 FBXO36Q8NEA4 188 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 AP4E1Q9UPM8 1137 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 CDY2AQ9Y6F7 541 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 MYADML2A6NDP7 307 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 FAM47DPA6NHR8 397 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 CYB561D2O14569 222 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 SLC10A3P09131 477 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 KRT15P19012 456 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 TFE3P19532 575 aaPredicted RBP16.3■□□□□ 0.2
MKS1-204ENST00000537529 TKTP29401 623 aaKnown RBP16.3■□□□□ 0.2
MKS1-204ENST00000537529 L1CAMP32004 1257 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 STX2P32856 288 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 MPP2Q14168 576 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 KCNJ11Q14654 390 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 STRADAQ7RTN6 431 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 PALM2Q8IXS6 379 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 SGSM3Q96HU1 749 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 DUSP16Q9BY84 665 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 FRMD8Q9BZ67 464 aaPredicted RBP16.3■□□□□ 0.2
MKS1-204ENST00000537529 TRABDQ9H4I3 376 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 DHX35Q9H5Z1 703 aaKnown RBP16.3■□□□□ 0.2
MKS1-204ENST00000537529 NRDE2Q9H7Z3 1164 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 USP29Q9HBJ7 922 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 GJA9P57773 515 aa16.29■□□□□ 0.2
MKS1-204ENST00000537529 GNASQ5JWF2 1037 aa16.29■□□□□ 0.2
MKS1-204ENST00000537529 C4orf22Q6V702 233 aa16.29■□□□□ 0.2
MKS1-204ENST00000537529 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
MKS1-204ENST00000537529 ACSS3Q9H6R3 686 aa16.29■□□□□ 0.2
MKS1-204ENST00000537529 GTF2IRD1Q9UHL9 959 aa16.29■□□□□ 0.2
MKS1-204ENST00000537529 RABGEF1Q9UJ41 708 aa16.29■□□□□ 0.2
MKS1-204ENST00000537529 SMG5Q9UPR3 1016 aaKnown RBP16.29■□□□□ 0.2
MKS1-204ENST00000537529 TCP11X1B4DZS4 312 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 DAB1O75553 588 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 TOMM70O94826 608 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 CPP00450 1065 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 PTPN1P18031 435 aaKnown RBP16.28■□□□□ 0.2
MKS1-204ENST00000537529 MATKP42679 507 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 CRHR2Q13324 411 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 MFSD14CQ5VZR4 134 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 PIGZQ86VD9 579 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 FUKQ8N0W3 1084 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 MICALL1Q8N3F8 863 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 GDAP1Q8TB36 358 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 ZFP42Q96MM3 310 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 SMC6Q96SB8 1091 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 ELAC2Q9BQ52 826 aaKnown RBP16.28■□□□□ 0.2
MKS1-204ENST00000537529 KLC2Q9H0B6 622 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 ACTR5Q9H9F9 607 aaPredicted RBP16.28■□□□□ 0.2
MKS1-204ENST00000537529 MLXIPLQ9NP71 852 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 NMRK2Q9NPI5 230 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 RAB6BQ9NRW1 208 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.28■□□□□ 0.2
MKS1-204ENST00000537529 TRPM7Q96QT4 1865 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 PRPF4O43172 522 aaKnown RBP eCLIP16.28■□□□□ 0.2
MKS1-204ENST00000537529 FSBPO95073 299 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 NPR3P17342 541 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 RBL1P28749 1068 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 SSTR1P30872 391 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 NR2C2P49116 596 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 SULT1E1P49888 294 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 SLC18A1P54219 525 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 NRLP54845 237 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 IL9RQ01113 521 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 ADIGQ0VDE8 80 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 SREBF2Q12772 1141 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 XRCC4Q13426 336 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 PKN2Q16513 984 aaKnown RBP16.28■□□□□ 0.2
MKS1-204ENST00000537529 NBPF20Q3BBV1 942 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 WSCD1Q658N2 575 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 C3orf62Q6ZUJ4 267 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 SAPCD2Q86UD0 394 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 MAGEB18Q96M61 343 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 KCTD15Q96SI1 283 aaPredicted RBP16.28■□□□□ 0.2
MKS1-204ENST00000537529 WDR83Q9BRX9 315 aaKnown RBP16.28■□□□□ 0.2
MKS1-204ENST00000537529 MED10Q9BTT4 135 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 SPC25Q9HBM1 224 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 CHST12Q9NRB3 414 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 FAM105AQ9NUU6 356 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 ST3GAL5Q9UNP4 418 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 DOCK3Q8IZD9 2030 aa16.28■□□□□ 0.2
MKS1-204ENST00000537529 SPAG6O75602 509 aa16.27■□□□□ 0.2
MKS1-204ENST00000537529 CYBAP13498 195 aa16.27■□□□□ 0.2
MKS1-204ENST00000537529 SLC25A52Q3SY17 297 aa16.27■□□□□ 0.2
MKS1-204ENST00000537529 FBF1Q8TES7 1133 aa16.27■□□□□ 0.2
MKS1-204ENST00000537529 KCTD13Q8WZ19 329 aa16.27■□□□□ 0.2
MKS1-204ENST00000537529 FAM149B1Q96BN6 582 aa16.27■□□□□ 0.2
MKS1-204ENST00000537529 UPF3AQ9H1J1 476 aaKnown RBP16.27■□□□□ 0.2
MKS1-204ENST00000537529 TSPYL2Q9H2G4 693 aaPredicted RBP16.27■□□□□ 0.2
MKS1-204ENST00000537529 CHMP2BQ9UQN3 213 aa16.27■□□□□ 0.2
MKS1-204ENST00000537529 GABRDO14764 452 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 ATP2C2O75185 946 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 RPLP2P05387 115 aaKnown RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 RARBP10826 455 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 ACAT1P24752 427 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms