RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ARFGAP1Q8N6T3 406 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 STAG1Q8WVM7 1258 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 TRIM43Q96BQ3 446 aaPredicted RBP6.19□□□□□ -1.42
CCDC7-208ENST00000537047 MLXIPLQ9NP71 852 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 GAR1Q9NY12 217 aaKnown RBP6.19□□□□□ -1.42
CCDC7-208ENST00000537047 HS3ST3B1Q9Y662 390 aa6.19□□□□□ -1.42
CCDC7-208ENST00000537047 B4DGG1 531 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 PRAMEF2O60811 474 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 PIAS2O75928 621 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 GPC5P78333 572 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 DENND2CQ68D51 928 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 ANO7Q6IWH7 933 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 APOA5Q6Q788 366 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 VSTM1Q6UX27 236 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 C12orf76Q8N812 135 aaPredicted RBP6.18□□□□□ -1.42
CCDC7-208ENST00000537047 ZFYVE19Q96K21 471 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 SCNM1Q9BWG6 230 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 FAM234AQ9H0X4 552 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 USP29Q9HBJ7 922 aa6.18□□□□□ -1.42
CCDC7-208ENST00000537047 PRR23D1E9PI22 279 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-208ENST00000537047 GTPBP1O00178 669 aaKnown RBP6.17□□□□□ -1.42
CCDC7-208ENST00000537047 RAB27BO00194 218 aa6.17□□□□□ -1.42
CCDC7-208ENST00000537047 RRHO14718 337 aa6.17□□□□□ -1.42
CCDC7-208ENST00000537047 CA12O43570 354 aa6.17□□□□□ -1.42
CCDC7-208ENST00000537047 PRR23D2P0DMB1 279 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-208ENST00000537047 STIM1Q13586 685 aa6.17□□□□□ -1.42
CCDC7-208ENST00000537047 KPNB1Q14974 876 aaKnown RBP6.17□□□□□ -1.42
CCDC7-208ENST00000537047 SLC9C1Q4G0N8 1177 aa6.17□□□□□ -1.42
CCDC7-208ENST00000537047 ZNF549Q6P9A3 640 aa6.17□□□□□ -1.42
CCDC7-208ENST00000537047 USP49Q70CQ1 688 aa6.17□□□□□ -1.42
CCDC7-208ENST00000537047 C16orf71Q8IYS4 520 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-208ENST00000537047 PRR11Q96HE9 360 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-208ENST00000537047 HDAC9Q9UKV0 1011 aa6.17□□□□□ -1.42
CCDC7-208ENST00000537047 MBD3L4A6NDZ8 208 aaPredicted RBP6.16□□□□□ -1.42
CCDC7-208ENST00000537047 MBD3L3A6NE82 208 aaPredicted RBP6.16□□□□□ -1.42
CCDC7-208ENST00000537047 CCP110O43303 1012 aa6.16□□□□□ -1.42
CCDC7-208ENST00000537047 SMAD6O43541 496 aaKnown RBP6.16□□□□□ -1.42
CCDC7-208ENST00000537047 FGF2P09038 288 aa6.16□□□□□ -1.42
CCDC7-208ENST00000537047 BRAFP15056 766 aa6.16□□□□□ -1.42
CCDC7-208ENST00000537047 CPA2P48052 419 aa6.16□□□□□ -1.42
CCDC7-208ENST00000537047 ARHGEF7Q14155 803 aa6.16□□□□□ -1.42
CCDC7-208ENST00000537047 ERV3-1Q14264 604 aa6.16□□□□□ -1.42
CCDC7-208ENST00000537047 KCNAB1Q14722 419 aa6.16□□□□□ -1.42
CCDC7-208ENST00000537047 PIM3Q86V86 326 aa6.16□□□□□ -1.42
CCDC7-208ENST00000537047 RBMXL3Q8N7X1 1067 aaKnown RBP6.16□□□□□ -1.42
CCDC7-208ENST00000537047 TM2D2Q9BX73 214 aa6.16□□□□□ -1.42
CCDC7-208ENST00000537047 HIPK2Q9H2X6 1198 aa6.16□□□□□ -1.42
CCDC7-208ENST00000537047 CAPN8A6NHC0 703 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 C16orf96A6NNT2 1141 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 CTNND1O60716 968 aaKnown RBP6.15□□□□□ -1.42
CCDC7-208ENST00000537047 IL1R1P14778 569 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 ZKSCAN1P17029 563 aaPredicted RBP6.15□□□□□ -1.42
CCDC7-208ENST00000537047 YY1P25490 414 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 KLRC1P26715 233 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 RPS16P62249 146 aaKnown RBP6.15□□□□□ -1.42
CCDC7-208ENST00000537047 SEMA3AQ14563 771 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 CNN3Q15417 329 aaKnown RBP6.15□□□□□ -1.42
CCDC7-208ENST00000537047 LYZL4Q96KX0 146 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 TRMOQ9BU70 441 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 AS3MTQ9HBK9 375 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 WWOXQ9NZC7 414 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 MID2Q9UJV3 735 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 FZD4Q9ULV1 537 aa6.15□□□□□ -1.42
CCDC7-208ENST00000537047 NOP58Q9Y2X3 529 aaKnown RBP6.15□□□□□ -1.42
CCDC7-208ENST00000537047 SIRT4Q9Y6E7 314 aaPredicted RBP6.15□□□□□ -1.42
CCDC7-208ENST00000537047 CFAP69A5D8W1 941 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 FAM90A8PA6NJQ4 464 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 A6NNZ2 444 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 FAM90A13PP0C7W8 464 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 FAM90A24PP0C7X0 464 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 CLEC9AQ6UXN8 241 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 TFAP2DQ7Z6R9 452 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 KIAA0319LQ8IZA0 1049 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 PNPLA1Q8N8W4 532 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 CDH19Q9H159 772 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 TRIM36Q9NQ86 728 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 COL20A1Q9P218 1284 aa6.14□□□□□ -1.43
CCDC7-208ENST00000537047 NKX1-2Q9UD57 310 aaPredicted RBP6.14□□□□□ -1.43
CCDC7-208ENST00000537047 TTBK1Q5TCY1 1321 aaPredicted RBP6.14□□□□□ -1.43
CCDC7-208ENST00000537047 C2CD4BA6NLJ0 364 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 PRPF3O43395 683 aaKnown RBP6.13□□□□□ -1.43
CCDC7-208ENST00000537047 TULP3O75386 442 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 MBPP02686 304 aaPredicted RBP6.13□□□□□ -1.43
CCDC7-208ENST00000537047 TACR3P29371 465 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 UBAP2Q5T6F2 1119 aaKnown RBP6.13□□□□□ -1.43
CCDC7-208ENST00000537047 GRHL2Q6ISB3 625 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 RAVER1Q8IY67 606 aaKnown RBP6.13□□□□□ -1.43
CCDC7-208ENST00000537047 MMP21Q8N119 569 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 RUNDC1Q96C34 613 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 NMD3Q96D46 503 aaKnown RBP6.13□□□□□ -1.43
CCDC7-208ENST00000537047 TRMT61AQ96FX7 289 aaKnown RBP6.13□□□□□ -1.43
CCDC7-208ENST00000537047 SUCLG2Q96I99 432 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 HIC2Q96JB3 615 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 TMEM60Q9H2L4 133 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 ZIM2Q9NZV7 527 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 SLC27A6Q9Y2P4 619 aa6.13□□□□□ -1.43
CCDC7-208ENST00000537047 A8MVJ9 347 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 INPPL1O15357 1258 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 PDGFRBP09619 1106 aa6.12□□□□□ -1.43
CCDC7-208ENST00000537047 ADRA1DP25100 572 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms