RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PAPSS2O95340 614 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CDK11BP21127 795 aaKnown RBP18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 DRD1P21728 446 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 OPRD1P41143 372 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 YWHAEP62258 255 aaKnown RBP18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TCP11X2Q5H9J9 407 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CCDC186Q7Z3E2 898 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 LUZP1Q86V48 1076 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PIGZQ86VD9 579 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PPM1KQ8N3J5 372 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 ANKRD52Q8NB46 1076 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TSPAN16Q9UKR8 245 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 K7ESF4 209 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 SLC9A3R1O14745 358 aaPredicted RBP18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 AFPP02771 609 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 HOXC13P31276 330 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CETN1Q12798 172 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PPP2R5DQ14738 602 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 DHCR24Q15392 516 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 SGO2Q562F6 1265 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 RAB41Q5JT25 222 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 SCD5Q86SK9 330 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 SUMF1Q8NBK3 374 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 ATRIPQ8WXE1 791 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 UBXN6Q9BZV1 441 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 NUDT5Q9UKK9 219 aa18.8■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TULP2O00295 520 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 RNF40O75150 1001 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TPM2P07951 284 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PRKCSHP14314 528 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 MAN2A1Q16706 1144 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 GOLGA7BQ2TAP0 167 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 RHBDF2Q6PJF5 856 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TMEM270Q6UE05 265 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 ARHGEF19Q8IW93 802 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 EHBP1Q8NDI1 1231 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TUBGCP2Q9BSJ2 902 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 KLF16Q9BXK1 252 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 NACA2Q9H009 215 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TBC1D14Q9P2M4 693 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 SH3BP1Q9Y3L3 701 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 RNF225M0QZC1 329 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 MDM4O15151 490 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 GREM1O60565 184 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 IRF1P10914 325 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 VDRP11473 427 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 RARGP13631 454 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CD19P15391 556 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 ZNF18P17022 549 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 ATP5C1P36542 298 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PSEN1P49768 467 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 BCAT1P54687 386 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PDE4CQ08493 712 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 DMWDQ09019 674 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 FBXO43Q4G163 708 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 KLHDC10Q6PID8 442 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 RRAGAQ7L523 313 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 BBS7Q8IWZ6 715 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 ZNF276Q8N554 614 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 EXOC4Q96A65 974 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 HSD3B7Q9H2F3 369 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 NAGPAQ9UK23 515 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 DMXL1Q9Y485 3027 aa18.79■□□□□ 0.6
TNFRSF1A-209ENST00000536717 O00370 1275 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 XPO1O14980 1071 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 NRLP54845 237 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 GCNT1Q02742 428 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PKDCCQ504Y2 493 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 C12orf40Q86WS4 652 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TFAP2BQ92481 460 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 OTUB2Q96DC9 234 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 KREMEN1Q96MU8 473 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 ZSWIM1Q9BR11 485 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CLIC5Q9NZA1 410 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PCDHB4Q9Y5E5 795 aa18.78■□□□□ 0.6
TNFRSF1A-209ENST00000536717 DCHS1Q96JQ0 3298 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CHURC1-FNTBB4DL54 471 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PES1O00541 588 aaKnown RBP18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PAEPP09466 180 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 SLC8A3P57103 927 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 MESP2Q0VG99 397 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 BST2Q10589 180 aaKnown RBP18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 KRT31Q15323 416 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 VWA3BQ502W6 1294 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 LY6G5CQ5SRR4 150 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 RNF214Q8ND24 703 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 INTS2Q9H0H0 1204 aaKnown RBP18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 EPC1Q9H2F5 836 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 KIAA1257Q9ULG3 409 aa18.77■□□□□ 0.6
TNFRSF1A-209ENST00000536717 ANTXRLA6NF34 631 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ADH1CP00326 375 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 ADH5P11766 374 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 PLA2G4AP47712 749 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 SLC6A11P48066 632 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 TKTL1P51854 596 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 C10orf120Q5SQS8 335 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 PM20D1Q6GTS8 502 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 LCLAT1Q6UWP7 414 aa18.76■□□□□ 0.59
TNFRSF1A-209ENST00000536717 HTR3DQ70Z44 454 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms