RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 KIF5CO60282 957 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 F11P03951 625 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 HNRNPA1P09651 372 aaKnown RBP eCLIP12.05□□□□□ -0.48
CDCA3-206ENST00000536241 PTPN2P17706 415 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 TFE3P19532 575 aaPredicted RBP12.05□□□□□ -0.48
CDCA3-206ENST00000536241 ZNF143P52747 638 aaPredicted RBP12.05□□□□□ -0.48
CDCA3-206ENST00000536241 GNG11P61952 73 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 ATP11AP98196 1134 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 ZNF252P-AS1Q0IIN9 211 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 PIGHQ14442 188 aaPredicted RBP12.05□□□□□ -0.48
CDCA3-206ENST00000536241 C15orf59Q2T9L4 293 aaPredicted RBP12.05□□□□□ -0.48
CDCA3-206ENST00000536241 TMEM150AQ86TG1 271 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 CPNE8Q86YQ8 564 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 SLC35F6Q8N357 371 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 TRMT2BQ96GJ1 504 aaKnown RBP12.05□□□□□ -0.48
CDCA3-206ENST00000536241 DOCK6Q96HP0 2047 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 SLC2A13Q96QE2 648 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 CORO1BQ9BR76 489 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 PRKD2Q9BZL6 878 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 HCFC1R1Q9NWW0 138 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 DNMT3BQ9UBC3 853 aaKnown RBP12.05□□□□□ -0.48
CDCA3-206ENST00000536241 USTQ9Y2C2 406 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 PATJQ8NI35 1801 aa12.05□□□□□ -0.48
CDCA3-206ENST00000536241 PRRC2BQ5JSZ5 2229 aaKnown RBP12.05□□□□□ -0.48
CDCA3-206ENST00000536241 ZNF840PA6NDX5 716 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 DAB1O75553 588 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 PROSCO94903 275 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 ZDHHC11BP0C7U3 371 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 MYL4P12829 197 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 RARGP13631 454 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 POU3F3P20264 500 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-206ENST00000536241 GABRR2P28476 465 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 HOXA9P31269 272 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 SDC4P31431 198 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 PSEN1P49768 467 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 PITX1P78337 314 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-206ENST00000536241 ADAM15Q13444 863 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 CDO1Q16878 200 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 RAB6CQ53S08 254 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 DAB2IPQ5VWQ8 1189 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 CC2D1AQ6P1N0 951 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-206ENST00000536241 ELMSAN1Q6PJG2 1045 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 TMC5Q6UXY8 1006 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 TMEM184AQ6ZMB5 413 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 SLFN11Q7Z7L1 901 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 ARHGAP18Q8N392 663 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 ARFGAP1Q8N6T3 406 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 EFHBQ8N7U6 833 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 LRRC57Q8N9N7 239 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 TRIM58Q8NG06 486 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 FNIP1Q8TF40 1166 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 RNF139Q8WU17 664 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 OVCA2Q8WZ82 227 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 CASP10Q92851 521 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 ZNF707Q96C28 371 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-206ENST00000536241 CALR3Q96L12 384 aaKnown RBP12.04□□□□□ -0.48
CDCA3-206ENST00000536241 C16orf45Q96MC5 204 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-206ENST00000536241 TBCBQ99426 244 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 ADAM33Q9BZ11 813 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 RAB6CQ9H0N0 254 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 IL21Q9HBE4 155 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 ZDHHC7Q9NXF8 308 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 TRPM5Q9NZQ8 1165 aa12.04□□□□□ -0.48
CDCA3-206ENST00000536241 UXTQ9UBK9 157 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-206ENST00000536241 COL4A4P53420 1690 aaPredicted RBP12.04□□□□□ -0.48
CDCA3-206ENST00000536241 M0QYT0 321 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 XYLBO75191 536 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 GLP2RO95838 553 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 TBX18O95935 607 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 FTCDO95954 541 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 RALAP11233 206 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 GJA1P17302 382 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 COMTP21964 271 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 PTPN9P43378 593 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 PPP3CCP48454 512 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 SULT1E1P49888 294 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 SLC25A52Q3SY17 297 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 PABPC1LQ4VXU2 614 aaKnown RBP12.03□□□□□ -0.48
CDCA3-206ENST00000536241 SNX30Q5VWJ9 437 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 NYAP1Q6ZVC0 841 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 GAREM2Q75VX8 874 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 BEND5Q7L4P6 421 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 GRASPQ7Z6J2 395 aaPredicted RBP12.03□□□□□ -0.48
CDCA3-206ENST00000536241 TMC8Q8IU68 726 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 SYCE1Q8N0S2 351 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 PDZD8Q8NEN9 1154 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 ADAM32Q8TC27 787 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 NT5C3BQ969T7 300 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 ALS2CR12Q96Q35 445 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 WDR24Q96S15 920 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 NPY6RQ99463 290 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 GAS2L1Q99501 681 aaPredicted RBP12.03□□□□□ -0.48
CDCA3-206ENST00000536241 CNPY3Q9BT09 278 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 APOL5Q9BWW9 433 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 CCSER2Q9H7U1 834 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 PIDD1Q9HB75 910 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.03□□□□□ -0.48
CDCA3-206ENST00000536241 CLIC5Q9NZA1 410 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
CDCA3-206ENST00000536241 SFMBT1Q9UHJ3 866 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms