RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 GATMP50440 423 aa5.54□□□□□ -1.52
VBP1-203ENST00000535916 RAB27AP51159 221 aa5.54□□□□□ -1.52
VBP1-203ENST00000535916 ZNF750Q32MQ0 723 aa5.54□□□□□ -1.52
VBP1-203ENST00000535916 COLCA1Q6ZS62 124 aa5.54□□□□□ -1.52
VBP1-203ENST00000535916 C16orf71Q8IYS4 520 aaPredicted RBP5.54□□□□□ -1.52
VBP1-203ENST00000535916 C12orf76Q8N812 135 aaPredicted RBP5.54□□□□□ -1.52
VBP1-203ENST00000535916 ACRBPQ8NEB7 543 aa5.54□□□□□ -1.52
VBP1-203ENST00000535916 RIMKLBQ9ULI2 386 aa5.54□□□□□ -1.52
VBP1-203ENST00000535916 MAFFQ9ULX9 164 aa5.54□□□□□ -1.52
VBP1-203ENST00000535916 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.53□□□□□ -1.52
VBP1-203ENST00000535916 CAPN8A6NHC0 703 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 B4DGG1 531 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 PARP1P09874 1014 aaKnown RBP5.53□□□□□ -1.52
VBP1-203ENST00000535916 IBSPP21815 317 aaPredicted RBP5.53□□□□□ -1.52
VBP1-203ENST00000535916 STK3Q13188 491 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 ARHGEF7Q14155 803 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 SLC9C1Q4G0N8 1177 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 PIM3Q86V86 326 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 C11orf44Q8N8P7 122 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 HIC2Q96JB3 615 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 TRMOQ9BU70 441 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 FAM234AQ9H0X4 552 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 ZBTB40Q9NUA8 1239 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 WWOXQ9NZC7 414 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 HDAC9Q9UKV0 1011 aa5.53□□□□□ -1.52
VBP1-203ENST00000535916 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.53□□□□□ -1.52
VBP1-203ENST00000535916 FAM90A8PA6NJQ4 464 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 PRR23D1E9PI22 279 aaPredicted RBP5.52□□□□□ -1.53
VBP1-203ENST00000535916 FYB1O15117 783 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 MARCH6O60337 910 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 FAM90A13PP0C7W8 464 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 FAM90A24PP0C7X0 464 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 PRR23D2P0DMB1 279 aaPredicted RBP5.52□□□□□ -1.53
VBP1-203ENST00000535916 BRAFP15056 766 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 GPC5P78333 572 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 MTX1Q13505 466 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 C3orf38Q5JPI3 329 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 APOA5Q6Q788 366 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 PNPLA1Q8N8W4 532 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 WIPF2Q8TF74 440 aaPredicted RBP5.52□□□□□ -1.53
VBP1-203ENST00000535916 STAG1Q8WVM7 1258 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 LYZL4Q96KX0 146 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 CAMK1GQ96NX5 476 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 CDH19Q9H159 772 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 TMEM60Q9H2L4 133 aa5.52□□□□□ -1.53
VBP1-203ENST00000535916 TYW1Q9NV66 732 aaKnown RBP5.52□□□□□ -1.53
VBP1-203ENST00000535916 NKX1-2Q9UD57 310 aaPredicted RBP5.52□□□□□ -1.53
VBP1-203ENST00000535916 A8MVJ9 347 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 RAB27BO00194 218 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 CTNND1O60716 968 aaKnown RBP5.51□□□□□ -1.53
VBP1-203ENST00000535916 TULP3O75386 442 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 ACVR2AP27037 513 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 TACR3P29371 465 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 NTSR1P30989 418 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 CPA2P48052 419 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 HSF1Q00613 529 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 STIM1Q13586 685 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 CNN3Q15417 329 aaKnown RBP5.51□□□□□ -1.53
VBP1-203ENST00000535916 USP49Q70CQ1 688 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 KIAA0319LQ8IZA0 1049 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 NGDNQ8NEJ9 315 aaKnown RBP5.51□□□□□ -1.53
VBP1-203ENST00000535916 RUNDC1Q96C34 613 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 NMD3Q96D46 503 aaKnown RBP5.51□□□□□ -1.53
VBP1-203ENST00000535916 DHX36Q9H2U1 1008 aaKnown RBP5.51□□□□□ -1.53
VBP1-203ENST00000535916 USP29Q9HBJ7 922 aa5.51□□□□□ -1.53
VBP1-203ENST00000535916 SMAD6O43541 496 aaKnown RBP5.5□□□□□ -1.53
VBP1-203ENST00000535916 PRAMEF2O60811 474 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 RFPL1O75677 317 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 ZKSCAN1P17029 563 aaPredicted RBP5.5□□□□□ -1.53
VBP1-203ENST00000535916 TNFRSF1BP20333 461 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 ADRA1DP25100 572 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 CPT1AP50416 773 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 RPS16P62249 146 aaKnown RBP5.5□□□□□ -1.53
VBP1-203ENST00000535916 ERV3-1Q14264 604 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 SLC29A2Q14542 456 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 SEMA3AQ14563 771 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 KPNB1Q14974 876 aaKnown RBP5.5□□□□□ -1.53
VBP1-203ENST00000535916 PFKFB3Q16875 520 aaPredicted RBP5.5□□□□□ -1.53
VBP1-203ENST00000535916 ZNF793Q6ZN11 406 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 UBE2Q1Q7Z7E8 422 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 PELI3Q8N2H9 469 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 HIPK2Q9H2X6 1198 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 AFF4Q9UHB7 1163 aaKnown RBP5.5□□□□□ -1.53
VBP1-203ENST00000535916 MID2Q9UJV3 735 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 FZD4Q9ULV1 537 aa5.5□□□□□ -1.53
VBP1-203ENST00000535916 CFAP69A5D8W1 941 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 RRHO14718 337 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 INPPL1O15357 1258 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 PDGFRBP09619 1106 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 IL1R1P14778 569 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 CD19P15391 556 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 TXNL4AP83876 142 aaKnown RBP5.49□□□□□ -1.53
VBP1-203ENST00000535916 ST3GAL2Q16842 350 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 ZNF549Q6P9A3 640 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 CLEC9AQ6UXN8 241 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 MMP21Q8N119 569 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 SMRP1Q8NCR6 262 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 MPLKIPQ8TAP9 179 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 HIST1H2AAQ96QV6 131 aa5.49□□□□□ -1.53
VBP1-203ENST00000535916 SCNM1Q9BWG6 230 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms