RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 UPP1Q16831 310 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 LIMS2Q7Z4I7 341 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 TP53INP2Q8IXH6 220 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 ZMIZ2Q8NF64 920 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 CPT1BQ92523 772 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 KCTD15Q96SI1 283 aaPredicted RBP19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 CEP41Q9BYV8 373 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 YJEFN3A6XGL0 299 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 E7ENQ6 273 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 AMPD1P23109 780 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 SLC10A2Q12908 348 aaPredicted RBP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 PDIA2Q13087 525 aaKnown RBP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 RTN4RL1Q86UN2 441 aaPredicted RBP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 ZNF280BQ86YH2 543 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 LRRC4Q9HBW1 653 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 HCSTQ9UBK5 93 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 SLC12A6Q9UHW9 1150 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 AP4E1Q9UPM8 1137 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 BPTFQ12830 3046 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 RBL1P28749 1068 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 EFTUD2Q15029 972 aaKnown RBP eCLIP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 LRRC14Q15048 493 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 SLC26A9Q7LBE3 791 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 HOOK3Q86VS8 718 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 TLCD1Q96CP7 247 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 HNRNPABQ99729 332 aaKnown RBP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 RTP3Q9BQQ7 232 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 DRG1Q9Y295 367 aaKnown RBP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 E7EVH7 732 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 GABRDO14764 452 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 KCNN4O15554 427 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 ALDH1A1P00352 501 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 SETSIPP0DME0 302 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 BDNFP23560 247 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 CYP2F1P24903 491 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 IFNAR2P48551 515 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 EIF3BP55884 814 aaKnown RBP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 OTUD1Q5VV17 481 aaPredicted RBP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 DRICH1Q6PGQ1 229 aaPredicted RBP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 SIX6OS1Q8N1H7 587 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 PRCCQ92733 491 aaPredicted RBP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 VPS37BQ9H9H4 285 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 MTMR10Q9NXD2 777 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 SNX10Q9Y5X0 201 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 PDE4DIPQ5VU43 2346 aa19.03■□□□□ 0.64
HTATSF1-204ENST00000535601 POC1B-GALNT4F8VUJ3 575 aa19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 XPO1O14980 1071 aaKnown RBP19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 L1CAMP32004 1257 aa19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 ROR1Q01973 937 aa19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 LMNB2Q03252 620 aa19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 AGBL2Q5U5Z8 902 aa19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 FAM35AQ86V20 835 aa19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 ZCCHC9Q8N567 271 aaKnown RBP19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 SH3TC2Q8TF17 1288 aa19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 PCDH9Q9HC56 1237 aa19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 ANLNQ9NQW6 1124 aa19.02■□□□□ 0.64
HTATSF1-204ENST00000535601 CREB3O43889 395 aa19.02■□□□□ 0.63
HTATSF1-204ENST00000535601 ENDOD1O94919 500 aa19.02■□□□□ 0.63
HTATSF1-204ENST00000535601 INHAP05111 366 aa19.02■□□□□ 0.63
HTATSF1-204ENST00000535601 FAM200BP0CF97 657 aa19.02■□□□□ 0.63
HTATSF1-204ENST00000535601 TRMT10CQ7L0Y3 403 aaKnown RBP19.02■□□□□ 0.63
HTATSF1-204ENST00000535601 RNF180Q86T96 592 aa19.02■□□□□ 0.63
HTATSF1-204ENST00000535601 LRRTM3Q86VH5 581 aa19.02■□□□□ 0.63
HTATSF1-204ENST00000535601 CCDC110Q8TBZ0 833 aa19.02■□□□□ 0.63
HTATSF1-204ENST00000535601 WDR83Q9BRX9 315 aaKnown RBP19.02■□□□□ 0.63
HTATSF1-204ENST00000535601 M0QYT0 321 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 CKBP12277 381 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 SSTR1P30872 391 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 TRIM71Q2Q1W2 868 aaKnown RBP19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 ERMARDQ5T6L9 678 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 PLCD3Q8N3E9 789 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 B3GALT6Q96L58 329 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 TRIM56Q9BRZ2 755 aaKnown RBP19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 SLC38A7Q9NVC3 462 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 LCMT1Q9UIC8 334 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 PRG3Q9Y2Y8 225 aaPredicted RBP19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 CASP8AP2Q9UKL3 1982 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 A0A0U1RQF3 1178 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 DPYSL4O14531 572 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 CHN1P15882 459 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 ACAP1Q15027 740 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 NOMO1Q15155 1222 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 SMAD1Q15797 465 aaKnown RBP19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 BBS9Q3SYG4 887 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 CD300LGQ6UXG3 332 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 OR10T2Q8NGX3 314 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 SLC7A14Q8TBB6 771 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 MYLPFQ96A32 169 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 PIH1D1Q9NWS0 290 aaKnown RBP19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 CWC15Q9P013 229 aaKnown RBP19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 NUDT5Q9UKK9 219 aa19.01■□□□□ 0.63
HTATSF1-204ENST00000535601 APOL1O14791 398 aa19■□□□□ 0.63
HTATSF1-204ENST00000535601 GATMP50440 423 aa19■□□□□ 0.63
HTATSF1-204ENST00000535601 MRPS5P82675 430 aaKnown RBP19■□□□□ 0.63
HTATSF1-204ENST00000535601 STK32AQ8WU08 396 aa19■□□□□ 0.63
HTATSF1-204ENST00000535601 GLT1D1Q96MS3 346 aa19■□□□□ 0.63
HTATSF1-204ENST00000535601 PIGVQ9NUD9 493 aa19■□□□□ 0.63
HTATSF1-204ENST00000535601 GIT1Q9Y2X7 761 aa19■□□□□ 0.63
HTATSF1-204ENST00000535601 I6L893 689 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms