RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 COG5Q9UP83 839 aa6.34□□□□□ -1.39
TNFRSF1A-206ENST00000535038 COQ4Q9Y3A0 265 aa6.34□□□□□ -1.39
TNFRSF1A-206ENST00000535038 PCDHA3Q9Y5H8 950 aa6.34□□□□□ -1.39
TNFRSF1A-206ENST00000535038 DOCK1Q14185 1865 aa6.34□□□□□ -1.39
TNFRSF1A-206ENST00000535038 KIAA1217Q5T5P2 1943 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ASTN2O75129 1339 aaPredicted RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ANKRD62A6NC57 917 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TCP10L2B9ZVM9 353 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 FOXN3O00409 490 aaPredicted RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 MATN3O15232 486 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PPFIA2O75334 1257 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TRIM49P0CI25 452 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TRIM49CP0CI26 452 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 VCAM1P19320 739 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 HSD17B3P37058 310 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PEX5P50542 639 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 DRG2P55039 364 aaKnown RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PTENP60484 403 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZXDAP98168 799 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 MYL7Q01449 175 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PPP3CAQ08209 521 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TKFCQ3LXA3 575 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PRR31Q5SQ13 230 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CFAP58Q5T655 872 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 AGBL2Q5U5Z8 902 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 DUPD1Q68J44 220 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CCDC174Q6PII3 467 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 INTS8Q75QN2 995 aaKnown RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 VPS36Q86VN1 386 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 RIOX2Q8IUF8 465 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ARHGEF19Q8IW93 802 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 FAM178BQ8IXR5 827 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 C4orf19Q8IY42 314 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 FAM71AQ8IYT1 594 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TXNDC5Q8NBS9 432 aaKnown RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 AGBL3Q8NEM8 1001 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CHST13Q8NET6 341 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 NPLOC4Q8TAT6 608 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SLC35G2Q8TBE7 412 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 U2AF1L4Q8WU68 220 aaKnown RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TAF4BQ92750 862 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 HVCN1Q96D96 273 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SEC16BQ96JE7 1060 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ATP6V1G3Q96LB4 118 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CCDC43Q96MW1 224 aaKnown RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 AGPAT1Q99943 283 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SENP7Q9BQF6 1050 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 YIPF4Q9BSR8 244 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 C1QTNF3Q9BXJ4 246 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CAPS2Q9BXY5 557 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TSPYL1Q9H0U9 437 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TMEM206Q9H813 350 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SLC38A10Q9HBR0 1119 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 KCNH7Q9NS40 1196 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZDHHC18Q9NUE0 388 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TAS2R14Q9NYV8 317 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SLC12A6Q9UHW9 1150 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 NOCTQ9UK39 431 aaKnown RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 NR2E1Q9Y466 385 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 TIMM13Q9Y5L4 95 aaPredicted RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZHX2Q9Y6X8 837 aa6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 COL11A1P12107 1806 aaPredicted RBP6.33□□□□□ -1.4
TNFRSF1A-206ENST00000535038 EMSYQ7Z589 1322 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 A0A0U1RQG5 324 aaPredicted RBP6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CLRN2A0PK11 232 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 HMGB1P1B2RPK0 211 aaPredicted RBP6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 C1QTNF3-AMACRE9PGA6 284 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 WDR46O15213 610 aaKnown RBP6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CEP104O60308 925 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ADRB2P07550 413 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ASNSP08243 561 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PAEPP09466 180 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CCDC172P0C7W6 258 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 GZMAP12544 262 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZNF20P17024 532 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CTNNA2P26232 953 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ADSSP30520 456 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 STAT5AP42229 794 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CYP2J2P51589 502 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 GTF2A2P52657 109 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 NAP1L1P55209 391 aaKnown RBP6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 UBXN2AP68543 259 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZNF844Q08AG5 666 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 IKQ13123 557 aaPredicted RBP6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 DLGAP5Q15398 846 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 SIX1Q15475 284 aaPredicted RBP6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CYP1B1Q16678 543 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 UGCGQ16739 394 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZNF568Q3ZCX4 644 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ODR4Q5SWX8 454 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 GLB1LQ6UWU2 654 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZDHHC24Q6UX98 284 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 CEP68Q76N32 757 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 MIER3Q7Z3K6 550 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 PEX26Q7Z412 305 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 RHOT2Q8IXI1 618 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 KLHL7Q8IXQ5 586 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 RTKN2Q8IZC4 609 aa6.32□□□□□ -1.4
TNFRSF1A-206ENST00000535038 ZSWIM2Q8NEG5 633 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms