RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SCAMP5Q8TAC9 235 aa10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 CD101Q93033 1021 aa10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 ACDQ96AP0 544 aa10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 SMARCD1Q96GM5 515 aa10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 TNIP3Q96KP6 325 aa10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 ZFRQ96KR1 1074 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 SLITRK1Q96PX8 696 aa10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 SMOQ99835 787 aa10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 DUSP9Q99956 384 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 P2RY13Q9BPV8 354 aa10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 CCDC86Q9H6F5 360 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 APOBEC3GQ9HC16 384 aaKnown RBP10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 HMGXB4Q9UGU5 601 aa10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 EVLQ9UI08 416 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 FRMD4BQ9Y2L6 1034 aa10.67□□□□□ -0.7
CLSTN3-203ENST00000534830 A0A0A0MRY4 1105 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 HHLA1C9JL84 531 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 K7EQS6 105 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 NFATC1O95644 943 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 CHRM1P11229 460 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 P4HA1P13674 534 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 NR2F2P24468 414 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 TUBP50607 506 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 NDST1P52848 882 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 SLC5A3P53794 718 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 ATXN3P54252 364 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 FAM193AP78312 1265 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 PPP3CAQ08209 521 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 C19orf57Q0VDD7 668 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 NR1H3Q13133 447 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 SEMA3BQ13214 749 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 ZNF423Q2M1K9 1284 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 EDRF1Q3B7T1 1238 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 COBLL1Q53SF7 1204 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 CEP135Q66GS9 1140 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 ANO7Q6IWH7 933 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 SCARA5Q6ZMJ2 495 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 INTS8Q75QN2 995 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 ARMCX6Q7L4S7 300 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 RAB44Q7Z6P3 723 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 PIP4P1Q86T03 277 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 ACOT1Q86TX2 421 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 TTC30AQ86WT1 665 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 FMR1NBQ8N0W7 255 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 PDZD8Q8NEN9 1154 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 WHAMMQ8TF30 809 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 FBXO32Q969P5 355 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 EXOC4Q96A65 974 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 GTPBP2Q9BX10 602 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 GDPD2Q9HCC8 539 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 CPQQ9Y646 472 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 ADAMTS9Q9P2N4 1935 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 APC2O95996 2303 aa10.66□□□□□ -0.7
CLSTN3-203ENST00000534830 URB1O60287 2271 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 ATP8B3O60423 1300 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 MAP3K13O43283 966 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 COCHO43405 550 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 AP1G2O75843 785 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 CYP17A1P05093 508 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 CFIP05156 583 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 CCDC130P13994 396 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 PSMC2P35998 433 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 PGFP49763 221 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 ADAM9Q13443 819 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 DHCR24Q15392 516 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 RHBDF2Q6PJF5 856 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 LPCAT2Q7L5N7 544 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 FILIP1Q7Z7B0 1213 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 DDX42Q86XP3 938 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 ZC3H3Q8IXZ2 948 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 C12orf29Q8N999 325 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 ENGASEQ8NFI3 743 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 SPATA20Q8TB22 786 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 MDM1Q8TC05 714 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 TAS1R2Q8TE23 839 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 CCDC47Q96A33 483 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 FAXDC2Q96IV6 333 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 TWNKQ96RR1 684 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 HNRNPABQ99729 332 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 CYP3A43Q9HB55 503 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 DMAP1Q9NPF5 467 aaPredicted RBP10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 FSCN3Q9NQT6 498 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 CHORDC1Q9UHD1 332 aaPredicted RBP10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 MBD1Q9UIS9 605 aaPredicted RBP10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 MAPK8IP1Q9UQF2 711 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 RAXQ9Y2V3 346 aa10.65□□□□□ -0.7
CLSTN3-203ENST00000534830 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 E2F8A0AVK6 867 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 ANTXRLA6NF34 631 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 UPK3BL1B0FP48 263 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 UPK3BL2E5RIL1 263 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 SLC9A3R1O14745 358 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 GREM1O60565 184 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 CILPO75339 1184 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 PRB1P04280 392 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 TRIM49P0CI25 452 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 TRIM49CP0CI26 452 aa10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 RPL13P26373 211 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-203ENST00000534830 GTF2H1P32780 548 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms