RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 BCCIPQ9P287 314 aaKnown RBP eCLIP8.53□□□□□ -1.04
LINC00958-207ENST00000534477 NXF1Q9UBU9 619 aaKnown RBP8.53□□□□□ -1.04
LINC00958-207ENST00000534477 DNMT3LQ9UJW3 386 aa8.53□□□□□ -1.04
LINC00958-207ENST00000534477 CDH9Q9ULB4 789 aa8.53□□□□□ -1.04
LINC00958-207ENST00000534477 EML5Q05BV3 1969 aa8.53□□□□□ -1.04
LINC00958-207ENST00000534477 GREB1Q4ZG55 1949 aa8.52□□□□□ -1.04
LINC00958-207ENST00000534477 LEFTY2O00292 366 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 CLDN5O00501 218 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 MAN1A2O60476 641 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 FOXD2O60548 495 aaPredicted RBP8.52□□□□□ -1.05
LINC00958-207ENST00000534477 RHOBTB1O94844 696 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 CAVIN2O95810 425 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 IRF1P10914 325 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 MBL2P11226 248 aaPredicted RBP8.52□□□□□ -1.05
LINC00958-207ENST00000534477 CASP1P29466 404 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 HOXA6P31267 233 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 GNL1P36915 607 aaPredicted RBP8.52□□□□□ -1.05
LINC00958-207ENST00000534477 POU5F1Q01860 360 aaKnown RBP8.52□□□□□ -1.05
LINC00958-207ENST00000534477 BIRC3Q13489 604 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 CUL4AQ13619 759 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 SURF1Q15526 300 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 UAP1L1Q3KQV9 507 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 PLK5Q496M5 336 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 CFAP221Q4G0U5 840 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 FBXO43Q4G163 708 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 PSAPL1Q6NUJ1 521 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 SCARA5Q6ZMJ2 495 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 DENND5BQ6ZUT9 1274 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 SYT13Q7L8C5 426 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 TRAPPC11Q7Z392 1133 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 FILIP1Q7Z7B0 1213 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 SFTPA1Q8IWL2 248 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 PGBD3Q8N328 593 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 CAMKK1Q8N5S9 505 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 KBTBD7Q8WVZ9 684 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 DDX1Q92499 740 aaKnown RBP8.52□□□□□ -1.05
LINC00958-207ENST00000534477 TRMT2BQ96GJ1 504 aaKnown RBP8.52□□□□□ -1.05
LINC00958-207ENST00000534477 PCED1BQ96HM7 432 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 FUBP3Q96I24 572 aaKnown RBP eCLIP8.52□□□□□ -1.05
LINC00958-207ENST00000534477 MYRFLQ96LU7 910 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 PKMYT1Q99640 499 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 ZNF518BQ9C0D4 1074 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 NACA2Q9H009 215 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 BLZF1Q9H2G9 400 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 DPEP3Q9H4B8 488 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 VPS45Q9NRW7 570 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 GCNT4Q9P109 453 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 CFAP97Q9P2B7 532 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 MTMR6Q9Y217 621 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 CPQQ9Y646 472 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 ANAPC1Q9H1A4 1944 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 CACNA1BQ00975 2339 aa8.52□□□□□ -1.05
LINC00958-207ENST00000534477 MYO16Q9Y6X6 1858 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 HELZP42694 1942 aaKnown RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 C4orf47A7E2U8 309 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 A8MXQ7 604 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 GABRDO14764 452 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 KLF8O95600 359 aaPredicted RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 BCKDHBP21953 392 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 WARSP23381 471 aaKnown RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 MAGEA11P43364 429 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 AFMP43652 599 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 RAP1GAPP47736 663 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 SLC6A11P48066 632 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 PDE6CP51160 858 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 NOVA1P51513 510 aaKnown RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 TAF10Q12962 218 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 SLC39A14Q15043 492 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 MAPRE1Q15691 268 aaKnown RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 SNRNP35Q16560 246 aaKnown RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 WDR72Q3MJ13 1102 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 USP39Q53GS9 565 aaKnown RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 FAM26FQ5R3K3 315 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 TDRD10Q5VZ19 366 aaKnown RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 FAM171BQ6P995 826 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 DPH6Q7L8W6 267 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 WDR49Q8IV35 697 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 ALLCQ8N6M5 410 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 NAT16Q8N8M0 369 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 TXNDC5Q8NBS9 432 aaKnown RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 CXorf38Q8TB03 319 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 MYCBPAPQ8TBZ2 947 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 RLN3Q8WXF3 142 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 PIGKQ92643 395 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 JAKMIP2Q96AA8 810 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 IFT43Q96FT9 208 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 LOXL4Q96JB6 756 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 SLITRK1Q96PX8 696 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 LRRC27Q9C0I9 530 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 DUSP15Q9H1R2 295 aaPredicted RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 ANGPTL2Q9UKU9 493 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 ARHGAP26Q9UNA1 814 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 NME7Q9Y5B8 376 aa8.51□□□□□ -1.05
LINC00958-207ENST00000534477 TPRP12270 2363 aaKnown RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 ATXN2Q99700 1313 aaKnown RBP8.51□□□□□ -1.05
LINC00958-207ENST00000534477 THADAQ6YHU6 1953 aa8.5□□□□□ -1.05
LINC00958-207ENST00000534477 CCDC163A0A0D9SF12 145 aa8.5□□□□□ -1.05
LINC00958-207ENST00000534477 FRMD3A2A2Y4 597 aa8.5□□□□□ -1.05
LINC00958-207ENST00000534477 ZNF840PA6NDX5 716 aa8.5□□□□□ -1.05
LINC00958-207ENST00000534477 PATE3B3GLJ2 98 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms