RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 SLC6A11P48066 632 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 PGFP49763 221 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 PMS1P54277 932 aaKnown RBP14.11□□□□□ -0.15
CAPN1-228ENST00000534373 YWHAEP62258 255 aaKnown RBP14.11□□□□□ -0.15
CAPN1-228ENST00000534373 CRY1Q16526 586 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 CBWD6Q4V339 395 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 ZNF394Q53GI3 561 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 C2orf27AQ580R0 203 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 DCAF17Q5H9S7 520 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-228ENST00000534373 CBWD3Q5JTY5 395 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 CBWD5Q5RIA9 395 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 GPRIN1Q7Z2K8 1008 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 RASSF3Q86WH2 238 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 BBS7Q8IWZ6 715 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 ETFBKMTQ8IXQ9 262 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 ARHGAP18Q8N392 663 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 ANKRD52Q8NB46 1076 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 SLC4A11Q8NBS3 891 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 TSTD1Q8NFU3 115 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 NETO1Q8TDF5 533 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 TATDN2Q93075 761 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 SLC35C1Q96A29 364 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 HHIPQ96QV1 700 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 ARHGEF4Q9NR80 690 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 OSER1Q9NX31 292 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 WDR35Q9P2L0 1181 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 DEC1Q9P2X7 70 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 CDV3Q9UKY7 258 aaKnown RBP14.11□□□□□ -0.15
CAPN1-228ENST00000534373 KIAA1257Q9ULG3 409 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 A0A1W2PQH9 124 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 CYP26A1O43174 497 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 ALDH1A2O94788 518 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 RHOBTB1O94844 696 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 EPN2O95208 641 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 ZNF806P0C7X5 589 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 TBXAS1P24557 533 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-228ENST00000534373 KIR2DL1P43626 348 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-228ENST00000534373 ATXN1P54253 815 aaKnown RBP14.1□□□□□ -0.15
CAPN1-228ENST00000534373 COG7P83436 770 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 CUL2Q13617 745 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 USP39Q53GS9 565 aaKnown RBP14.1□□□□□ -0.15
CAPN1-228ENST00000534373 RAB41Q5JT25 222 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 EOGTQ5NDL2 527 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 PRR23CQ6ZRP0 262 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 KBTBD6Q86V97 674 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 C12orf40Q86WS4 652 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 TMEM25Q86YD3 366 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 PHTF2Q8N3S3 785 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 IL17RCQ8NAC3 791 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 JAKMIP2Q96AA8 810 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 CNOT6LQ96LI5 555 aaKnown RBP14.1□□□□□ -0.15
CAPN1-228ENST00000534373 XPO6Q96QU8 1125 aaKnown RBP14.1□□□□□ -0.15
CAPN1-228ENST00000534373 NMUR1Q9HB89 426 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 POLR3BQ9NW08 1133 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-228ENST00000534373 MARK1Q9P0L2 795 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 ZNF510Q9Y2H8 683 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 STARD13Q9Y3M8 1113 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 CACNA1AO00555 2505 aa14.1□□□□□ -0.15
CAPN1-228ENST00000534373 TRIM49BA6NDI0 452 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 TBC1D3BA6NDS4 549 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 SCAMP3O14828 347 aaKnown RBP14.09□□□□□ -0.15
CAPN1-228ENST00000534373 P4HA2O15460 535 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 TULP3O75386 442 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 SEC13P55735 322 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 CETN1Q12798 172 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 ELF2Q15723 593 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 ANO4Q32M45 955 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 PLK5Q496M5 336 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 C10orf120Q5SQS8 335 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 TRMT11Q7Z4G4 463 aaKnown RBP14.09□□□□□ -0.15
CAPN1-228ENST00000534373 SCD5Q86SK9 330 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 ERCC4Q92889 916 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-228ENST00000534373 ARID3AQ99856 593 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 POLMQ9NP87 494 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-228ENST00000534373 NAGPAQ9UK23 515 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 MAN1B1Q9UKM7 699 aa14.09□□□□□ -0.15
CAPN1-228ENST00000534373 CIZ1Q9ULV3 898 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-228ENST00000534373 BICDL2A1A5D9 508 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 SLC30A4O14863 429 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 CACNG3O60359 315 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 IRF1P10914 325 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 CHRM1P11229 460 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-228ENST00000534373 VDRP11473 427 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 TIE1P35590 1138 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 FMO5P49326 533 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 MESP2Q0VG99 397 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 SGO2Q562F6 1265 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 PLA2G2CQ5R387 149 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 PM20D1Q6GTS8 502 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 Q6ZNB5 142 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 PIGZQ86VD9 579 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 CCDC33Q8N5R6 958 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 ALLCQ8N6M5 410 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 TERB1Q8NA31 727 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 TXNDC5Q8NBS9 432 aaKnown RBP14.08□□□□□ -0.16
CAPN1-228ENST00000534373 WBP2Q969T9 261 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 DCLK3Q9C098 648 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 DUSP15Q9H1R2 295 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-228ENST00000534373 ARRDC1-AS1Q9H2J1 176 aa14.08□□□□□ -0.16
CAPN1-228ENST00000534373 HESX1Q9UBX0 185 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms