RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 TIGD6Q17RP2 521 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CCDC96Q2M329 555 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 C1QTNF12Q5T7M4 302 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 TAF2Q6P1X5 1199 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CFAP161Q6P656 301 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 USP17L6PQ6QN14 398 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CATSPERGQ6ZRH7 1159 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 MICU3Q86XE3 530 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 ADGRG5Q8IZF4 528 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 MPP5Q8N3R9 675 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 SLC15A4Q8N697 577 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 SLC30A5Q8TAD4 765 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CYP2W1Q8TAV3 490 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 ASB12Q8WXK4 309 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 GDF15Q99988 308 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 MESP1Q9BRJ9 268 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 FAM167BQ9BTA0 163 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 ZNF747Q9BV97 191 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 MS4A7Q9GZW8 240 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-210ENST00000534172 OSBPL5Q9H0X9 879 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-210ENST00000534172 UNKLQ9H9P5 680 aaKnown RBP4.01□□□□□ -1.77
CSMD3-210ENST00000534172 RASSF1Q9NS23 344 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 TM7SF3Q9NS93 570 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 NOL7Q9UMY1 257 aaKnown RBP4.01□□□□□ -1.77
CSMD3-210ENST00000534172 AGAP1Q9UPQ3 857 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CEP170BQ9Y4F5 1589 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-210ENST00000534172 TNS2Q63HR2 1409 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 COL16A1Q07092 1604 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-210ENST00000534172 LOC102723971A0A1B0GUV8 181 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 FAM234BA2RU67 622 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CCDC151A5D8V7 595 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 AQP7P3A6NL99 342 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 TISP43B9A030 160 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 B9A039 149 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 NDST3O95803 873 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 HKR1P10072 659 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 TXNP10599 105 aaKnown RBP4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CAPN3P20807 821 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 FAM189BP81408 668 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 PTK2BQ14289 1009 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 ALDH1L2Q3SY69 923 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 RRAGBQ5VZM2 374 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 FAAH2Q6GMR7 532 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 LIN54Q6MZP7 749 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 PDXDC1Q6P996 788 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 FBXO38Q6PIJ6 1188 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 UNC13DQ70J99 1090 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 SPRED1Q7Z699 444 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 MRGPREQ86SM8 312 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 TMTC1Q8IUR5 882 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 STYXQ8WUJ0 223 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 LRRC46Q96FV0 321 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 MAP7D2Q96T17 732 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CYP4F11Q9HBI6 524 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 IGSF9Q9P2J2 1179 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 ITGB1BP2Q9UKP3 347 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 C9orf84Q5VXU9 1444 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CNTLNQ9NXG0 1405 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 KRTAP4-8A0A0G2JLE6 195 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 CLCA1A8K7I4 914 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 PROM1O43490 865 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 TNFRSF6BO95407 300 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 IFIT1P09914 478 aaKnown RBP4□□□□□ -1.77
CSMD3-210ENST00000534172 TGM1P22735 817 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 PXNP49023 591 aaPredicted RBP4□□□□□ -1.77
CSMD3-210ENST00000534172 FSTL1Q12841 308 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 RAB30Q15771 203 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 GEN1Q17RS7 908 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 MZT2BQ6NZ67 158 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 CRIP3Q6Q6R5 217 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 SLC30A10Q6XR72 485 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 RNF44Q7L0R7 432 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 TBC1D1Q86TI0 1168 aaPredicted RBP4□□□□□ -1.77
CSMD3-210ENST00000534172 KRT73Q86Y46 540 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 ESX1Q8N693 406 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 AMER2Q8N7J2 671 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 B3GALNT2Q8NCR0 500 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 FAM71BQ8TC56 605 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 STT3BQ8TCJ2 826 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 TMEM125Q96AQ2 219 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 FAM136AQ96C01 138 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 TEX101Q9BY14 249 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 UNC45AQ9H3U1 944 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 ALG13Q9NP73 1137 aaKnown RBP4□□□□□ -1.77
CSMD3-210ENST00000534172 MAP3K2Q9Y2U5 619 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 MED14O60244 1454 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 DENND4BO75064 1496 aaPredicted RBP4□□□□□ -1.77
CSMD3-210ENST00000534172 SCAF11Q99590 1463 aaKnown RBP4□□□□□ -1.77
CSMD3-210ENST00000534172 CENPVL1A0A0U1RR11 272 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 AREL1O15033 823 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 FZD7O75084 574 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 TPM2P07951 284 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 EGR2P11161 476 aaPredicted RBP4□□□□□ -1.77
CSMD3-210ENST00000534172 INSRRP14616 1297 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 IL1R1P14778 569 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 NR4A1P22736 598 aa4□□□□□ -1.77
CSMD3-210ENST00000534172 CALRP27797 417 aaKnown RBP4□□□□□ -1.77
CSMD3-210ENST00000534172 TNNT2P45379 298 aaPredicted RBP4□□□□□ -1.77
CSMD3-210ENST00000534172 CARSP49589 748 aaKnown RBP4□□□□□ -1.77
CSMD3-210ENST00000534172 KRT17Q04695 432 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms