RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 PI4KAP42356 2102 aa22.57■■□□□ 1.2
SSH3-211ENST00000534112 DMXL2Q8TDJ6 3036 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 ZBTB24O43167 697 aaPredicted RBP22.56■■□□□ 1.2
SSH3-211ENST00000534112 STX6O43752 255 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 GREM1O60565 184 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 TLR5O60602 858 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 EXOC3O60645 756 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 BMT2Q1RMZ1 405 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 ZNF667Q5HYK9 610 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 EGFLAMQ63HQ2 1017 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 GRAMD4Q6IC98 578 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 SHC4Q6S5L8 630 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 SCARA5Q6ZMJ2 495 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 HTR3DQ70Z44 454 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 ACOT1Q86TX2 421 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 ZMIZ2Q8NF64 920 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 ZCCHC14Q8WYQ9 949 aaKnown RBP22.56■■□□□ 1.2
SSH3-211ENST00000534112 ELMO3Q96BJ8 720 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 ACOX2Q99424 681 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 SMOQ99835 787 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 SDCBP2Q9H190 292 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 KRT82Q9NSB4 513 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 DNAJC17Q9NVM6 304 aaKnown RBP22.56■■□□□ 1.2
SSH3-211ENST00000534112 MSRB2Q9Y3D2 182 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 PKD1L2Q7Z442 2459 aa22.56■■□□□ 1.2
SSH3-211ENST00000534112 IGHV1OR15-9A0A0B4J2B8 117 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 OPHN1O60890 802 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 BEST1O76090 585 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 CLSTN1O94985 981 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 TBX18O95935 607 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 CASP1P29466 404 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 NCOA4Q13772 614 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 KNOP1Q1ED39 458 aaKnown RBP22.55■■□□□ 1.2
SSH3-211ENST00000534112 RABEPKQ7Z6M1 372 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 CHPFQ8IZ52 775 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 KLF16Q9BXK1 252 aaPredicted RBP22.55■■□□□ 1.2
SSH3-211ENST00000534112 BLZF1Q9H2G9 400 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 CD248Q9HCU0 757 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 SLC39A2Q9NP94 309 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 KLK13Q9UKR3 277 aa22.55■■□□□ 1.2
SSH3-211ENST00000534112 NEDD8-MDP1E9PL57 170 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 ARHGAP33O14559 1287 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 CACNG3O60359 315 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 ZNF217O75362 1048 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 C4BPAP04003 597 aaKnown RBP22.54■■□□□ 1.2
SSH3-211ENST00000534112 AP3M2P53677 418 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 CLDN10P78369 228 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 SDE2Q6IQ49 451 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 SLC41A1Q8IVJ1 513 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 MINDY1Q8N5J2 469 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 SLC2A14Q8TDB8 520 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 PARD3BQ8TEW8 1205 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 IPO4Q8TEX9 1081 aaKnown RBP22.54■■□□□ 1.2
SSH3-211ENST00000534112 XPO6Q96QU8 1125 aaKnown RBP22.54■■□□□ 1.2
SSH3-211ENST00000534112 BBS2Q9BXC9 721 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 FBXO44Q9H4M3 255 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 TLR8Q9NR97 1041 aaKnown RBP22.54■■□□□ 1.2
SSH3-211ENST00000534112 FOXD4L1Q9NU39 408 aa22.54■■□□□ 1.2
SSH3-211ENST00000534112 LRRIQ3A6PVS8 624 aaPredicted RBP22.53■■□□□ 1.2
SSH3-211ENST00000534112 CUTAO60888 179 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 VNN1O95497 513 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 CCDC130P13994 396 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 TYRP14679 529 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 NDUFV2P19404 249 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 MAP3K7CLP57077 242 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 FAM193AP78312 1265 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 CRYBG2Q8N1P7 616 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 TRIML1Q8N9V2 468 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 OR2I1PQ8NGU4 316 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 ERLEC1Q96DZ1 483 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 GABRG3Q99928 467 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 MAGEF1Q9HAY2 307 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 CSNK1G1Q9HCP0 422 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 WDR35Q9P2L0 1181 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 CYP8B1Q9UNU6 501 aa22.53■■□□□ 1.2
SSH3-211ENST00000534112 PVALEFA0A1B0GWK0 134 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 A0A1W2PQD8 194 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 PRRT4C9JH25 899 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 H0Y626 953 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 POLR2DO15514 142 aaKnown RBP22.52■■□□□ 1.2
SSH3-211ENST00000534112 TRIM16O95361 564 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 CD59P13987 128 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 RDXP35241 583 aaKnown RBP22.52■■□□□ 1.2
SSH3-211ENST00000534112 ORC1Q13415 861 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 TPGS1Q6ZTW0 290 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 TOGARAM2Q6ZUX3 1019 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 GOLGA5Q8TBA6 731 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 HSPA12BQ96MM6 686 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 ZNF396Q96N95 335 aaPredicted RBP22.52■■□□□ 1.2
SSH3-211ENST00000534112 CYLDQ9NQC7 956 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 MARK1Q9P0L2 795 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 BAHCC1Q9P281 2608 aa22.52■■□□□ 1.2
SSH3-211ENST00000534112 TNRC6BQ9UPQ9 1833 aaKnown RBP22.52■■□□□ 1.2
SSH3-211ENST00000534112 DSPP15924 2871 aaKnown RBP22.51■■□□□ 1.19
SSH3-211ENST00000534112 YEATS4O95619 227 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 SYPP08247 313 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 P4HA1P13674 534 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 ATP5C1P36542 298 aaKnown RBP22.51■■□□□ 1.19
SSH3-211ENST00000534112 NDST1P52848 882 aa22.51■■□□□ 1.19
SSH3-211ENST00000534112 SGSM1Q2NKQ1 1148 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms