RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 SLC26A11Q86WA9 606 aa12.44□□□□□ -0.42
ATM-222ENST00000533733 TTC30AQ86WT1 665 aa12.44□□□□□ -0.42
ATM-222ENST00000533733 BANPQ8N9N5 519 aa12.44□□□□□ -0.42
ATM-222ENST00000533733 KLHL29Q96CT2 875 aa12.44□□□□□ -0.42
ATM-222ENST00000533733 ZBTB10Q96DT7 871 aa12.44□□□□□ -0.42
ATM-222ENST00000533733 C11orf84Q9BUA3 381 aaPredicted RBP12.44□□□□□ -0.42
ATM-222ENST00000533733 SNRNP25Q9BV90 132 aaKnown RBP12.44□□□□□ -0.42
ATM-222ENST00000533733 TRIM6Q9C030 488 aaPredicted RBP12.44□□□□□ -0.42
ATM-222ENST00000533733 XAB2Q9HCS7 855 aaKnown RBP12.44□□□□□ -0.42
ATM-222ENST00000533733 ARHGEF3Q9NR81 526 aa12.44□□□□□ -0.42
ATM-222ENST00000533733 MKS1Q9NXB0 559 aa12.44□□□□□ -0.42
ATM-222ENST00000533733 SNTG2Q9NY99 539 aa12.44□□□□□ -0.42
ATM-222ENST00000533733 A8MXQ7 604 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 PIRO00625 290 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 C2CD2LO14523 706 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 KCNN4O15554 427 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 PAPSS1O43252 624 aaPredicted RBP12.43□□□□□ -0.42
ATM-222ENST00000533733 CSDE1O75534 798 aaKnown RBP12.43□□□□□ -0.42
ATM-222ENST00000533733 UNC5CO95185 931 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 TGDSO95455 350 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 F2P00734 622 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 DARSP14868 501 aaKnown RBP12.43□□□□□ -0.42
ATM-222ENST00000533733 KCNE1P15382 129 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 IL4RP24394 825 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 ELK3P41970 407 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 PDE4CQ08493 712 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 PTK7Q13308 1070 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 TAF5Q15542 800 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 CDO1Q16878 200 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 SLC45A4Q5BKX6 768 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 XKR4Q5GH76 650 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 GJC2Q5T442 439 aaPredicted RBP12.43□□□□□ -0.42
ATM-222ENST00000533733 TRNP1Q6NT89 227 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 SCYL2Q6P3W7 929 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 ACOT1Q86TX2 421 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 ZC3H18Q86VM9 953 aaKnown RBP12.43□□□□□ -0.42
ATM-222ENST00000533733 C4orf33Q8N1A6 199 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 VPS52Q8N1B4 723 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 FITM2Q8N6M3 262 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 PQLC3Q8N755 202 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 OR6B3Q8NGW1 331 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 ZNF75CPQ92670 426 aaPredicted RBP12.43□□□□□ -0.42
ATM-222ENST00000533733 INPP5DQ92835 1189 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 APOPT1Q96IL0 206 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 MS4A4AQ96JQ5 239 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 LRRC37BQ96QE4 947 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 MRPL45Q9BRJ2 306 aaKnown RBP12.43□□□□□ -0.42
ATM-222ENST00000533733 NRDE2Q9H7Z3 1164 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 RAB6BQ9NRW1 208 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 ETNK2Q9NVF9 386 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 RPL26L1Q9UNX3 145 aaKnown RBP12.43□□□□□ -0.42
ATM-222ENST00000533733 CHMP2BQ9UQN3 213 aa12.43□□□□□ -0.42
ATM-222ENST00000533733 TCRBV9S1A1TA0A576 114 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 BTBD19C9JJ37 291 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 KLF11O14901 512 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 MLNP12872 115 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 EZRP15311 586 aaKnown RBP12.42□□□□□ -0.42
ATM-222ENST00000533733 PRKCHP24723 683 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 CNTFP26441 200 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 FDFT1P37268 417 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 TAF6P49848 677 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 SERPINB9P50453 376 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 GTF2A1P52655 376 aaPredicted RBP12.42□□□□□ -0.42
ATM-222ENST00000533733 AIF1P55008 147 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 MMRN1Q13201 1228 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 DNAJC3Q13217 504 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 DBN1Q16643 649 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 PARP6Q2NL67 630 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 CAPN12Q6ZSI9 719 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 ASRGL1Q7L266 308 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 LIMS2Q7Z4I7 341 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 CCNJLQ8IV13 435 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 NME8Q8N427 588 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 TOP6BLQ8N6T0 577 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 C12orf29Q8N999 325 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 PCDH19Q8TAB3 1148 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.42
ATM-222ENST00000533733 TMEM237Q96Q45 408 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 KATNAL1Q9BW62 490 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 SNX25Q9H3E2 840 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 SAR1AQ9NR31 198 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.42□□□□□ -0.42
ATM-222ENST00000533733 A0A1W2PPM1 405 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 TCRBV7S3A2A0A539 114 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 KPNA7A9QM74 516 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 KBTBD13C9JR72 458 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 XPO1O14980 1071 aaKnown RBP12.42□□□□□ -0.42
ATM-222ENST00000533733 LPXNO60711 386 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 KRT38O76015 456 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 WFS1O76024 890 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 ATP6V1G2O95670 118 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 ATP5BP06576 529 aaKnown RBP12.42□□□□□ -0.42
ATM-222ENST00000533733 SNRPAP09012 282 aaKnown RBP12.42□□□□□ -0.42
ATM-222ENST00000533733 DHRS4L1P0CG22 281 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 CYP2C9P11712 490 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 CYP2F1P24903 491 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 GNL1P36915 607 aaPredicted RBP12.42□□□□□ -0.42
ATM-222ENST00000533733 RGS7P49802 495 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 HDAC4P56524 1084 aa12.42□□□□□ -0.42
ATM-222ENST00000533733 YWHAGP61981 247 aaKnown RBP eCLIP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms