RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 NAT16Q8N8M0 369 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 SLC4A11Q8NBS3 891 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 ARID3AQ99856 593 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 DUSP9Q99956 384 aaKnown RBP16.27■□□□□ 0.2
CPSF1-211ENST00000533492 KLF16Q9BXK1 252 aaPredicted RBP16.27■□□□□ 0.2
CPSF1-211ENST00000533492 NMUR1Q9HB89 426 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 SPHK2Q9NRA0 654 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 OSER1Q9NX31 292 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 EBF1Q9UH73 591 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 DNMT3LQ9UJW3 386 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 NUDT5Q9UKK9 219 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 MAN1B1Q9UKM7 699 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 COQ4Q9Y3A0 265 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 TBC1D3BA6NDS4 549 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 TIE1P35590 1138 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 PLA2G4AP47712 749 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 KDSRQ06136 332 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 CUL2Q13617 745 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 CSRP2Q16527 193 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 CCDC40Q4G0X9 1142 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 ARHGAP17Q68EM7 881 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 KLHL10Q6JEL2 608 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 KLHDC10Q6PID8 442 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 KBTBD6Q86V97 674 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 TTC30AQ86WT1 665 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 TMEM25Q86YD3 366 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 WBP2Q969T9 261 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 SLC35C1Q96A29 364 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 LOXL4Q96JB6 756 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 CEP63Q96MT8 703 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.26■□□□□ 0.19
CPSF1-211ENST00000533492 DEC1Q9P2X7 70 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 MMP17Q9ULZ9 603 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.26■□□□□ 0.19
CPSF1-211ENST00000533492 MYO16Q9Y6X6 1858 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 SPAG17Q6Q759 2223 aa16.26■□□□□ 0.19
CPSF1-211ENST00000533492 A0A0A0MRY4 1105 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 MDM4O15151 490 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 HOXC11O43248 304 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-211ENST00000533492 FOXD2O60548 495 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-211ENST00000533492 ALDH1A2O94788 518 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 KLF8O95600 359 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-211ENST00000533492 TNFRSF4P43489 277 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 CETN1Q12798 172 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 LRMPQ12912 555 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 HSF5Q4G112 596 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-211ENST00000533492 USP39Q53GS9 565 aaKnown RBP16.25■□□□□ 0.19
CPSF1-211ENST00000533492 CCDC186Q7Z3E2 898 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 ALLCQ8N6M5 410 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 ANKRD52Q8NB46 1076 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 TXNDC5Q8NBS9 432 aaKnown RBP16.25■□□□□ 0.19
CPSF1-211ENST00000533492 CDK5RAP1Q96SZ6 601 aaKnown RBP16.25■□□□□ 0.19
CPSF1-211ENST00000533492 UBXN6Q9BZV1 441 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 ARRDC1-AS1Q9H2J1 176 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 USP3Q9Y6I4 520 aa16.25■□□□□ 0.19
CPSF1-211ENST00000533492 BICDL2A1A5D9 508 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 ANTXRLA6NF34 631 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 TULP3O75386 442 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 RHOBTB1O94844 696 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 CD19P15391 556 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 CD44P16070 742 aaKnown RBP16.24■□□□□ 0.19
CPSF1-211ENST00000533492 TBXAS1P24557 533 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-211ENST00000533492 ATXN1P54253 815 aaKnown RBP16.24■□□□□ 0.19
CPSF1-211ENST00000533492 MESP2Q0VG99 397 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 ELF2Q15723 593 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 CRY1Q16526 586 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 SGO2Q562F6 1265 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 EOGTQ5NDL2 527 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 EMC10Q5UCC4 262 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 ANO7Q6IWH7 933 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 PRR23CQ6ZRP0 262 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 TPGS1Q6ZTW0 290 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 SCD5Q86SK9 330 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 PIGZQ86VD9 579 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 MIB1Q86YT6 1006 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 SFTPA1Q8IWL2 248 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 ARHGAP18Q8N392 663 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 ZNF276Q8N554 614 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 NELFBQ8WX92 580 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 ZC3H10Q96K80 434 aaKnown RBP16.24■□□□□ 0.19
CPSF1-211ENST00000533492 XPO6Q96QU8 1125 aaKnown RBP16.24■□□□□ 0.19
CPSF1-211ENST00000533492 BBS2Q9BXC9 721 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 POLMQ9NP87 494 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-211ENST00000533492 CLIC5Q9NZA1 410 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 WDR35Q9P2L0 1181 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 HESX1Q9UBX0 185 aa16.24■□□□□ 0.19
CPSF1-211ENST00000533492 DCHS1Q96JQ0 3298 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-211ENST00000533492 NEDD8-MDP1E9PL57 170 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 BIN1O00499 593 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 GADD45BO75293 160 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-211ENST00000533492 GBP1P32455 592 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 FMO5P49326 533 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 COG7P83436 770 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 GOLGA7BQ2TAP0 167 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 PLK5Q496M5 336 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 RSRC2Q7L4I2 434 aaKnown RBP16.23■□□□□ 0.19
CPSF1-211ENST00000533492 ETFBKMTQ8IXQ9 262 aa16.23■□□□□ 0.19
CPSF1-211ENST00000533492 C12orf50Q8NA57 414 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-211ENST00000533492 IL17RCQ8NAC3 791 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms