RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 SPATA4Q8NEY3 305 aa12.82□□□□□ -0.36
TGFBR3-211ENST00000533370 FAM172AQ8WUF8 416 aa12.82□□□□□ -0.36
TGFBR3-211ENST00000533370 RBM41Q96IZ5 413 aaKnown RBP12.82□□□□□ -0.36
TGFBR3-211ENST00000533370 ZBP1Q9H171 429 aa12.82□□□□□ -0.36
TGFBR3-211ENST00000533370 EHD2Q9NZN4 543 aa12.82□□□□□ -0.36
TGFBR3-211ENST00000533370 STAP1Q9ULZ2 295 aa12.82□□□□□ -0.36
TGFBR3-211ENST00000533370 USP18Q9UMW8 372 aa12.82□□□□□ -0.36
TGFBR3-211ENST00000533370 FAM92AA1XBS5 289 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 LCHNA4D1U4 455 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 LINC01553A4QN01 128 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 C5orf67F2Z3F1 127 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 FSCN2O14926 492 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 TADA3O75528 432 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 F9P00740 461 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 FGGP02679 453 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 YWHAQP27348 245 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 YWHAGP61981 247 aaKnown RBP eCLIP12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 SLC25A11Q02978 314 aaKnown RBP12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 UBE3AQ05086 875 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 ZNF211Q13398 564 aaPredicted RBP12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 SHHQ15465 462 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 C9orf50Q5SZB4 431 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 SH3PXD2AQ5TCZ1 1133 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 DAB2IPQ5VWQ8 1189 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 SYPL2Q5VXT5 272 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 DENND5BQ6ZUT9 1274 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 HFE2Q6ZVN8 426 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 RSRC2Q7L4I2 434 aaKnown RBP12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 MMGT1Q8N4V1 131 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 CMASQ8NFW8 434 aaPredicted RBP12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 TEKT4Q8WW24 435 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 MAIP1Q8WWC4 291 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 UBXN4Q92575 508 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 TBCBQ99426 244 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 NPY6RQ99463 290 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 SEPT5Q99719 369 aaPredicted RBP12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 NGRNQ9NPE2 291 aaKnown RBP12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 ABCC13Q9NSE7 274 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 PCSK1NQ9UHG2 260 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 MTUS1Q9ULD2 1270 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 NAALADL1Q9UQQ1 740 aa12.81□□□□□ -0.36
TGFBR3-211ENST00000533370 MKI67P46013 3256 aaKnown RBP12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 KRIT1O00522 736 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 NCAM1P13591 858 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 TCF4P15884 667 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 IL1R2P27930 398 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 ELF1P32519 619 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 CTNNB1P35222 781 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 PTPN7P35236 360 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 GPR15P49685 360 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 HDAC4P56524 1084 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 PPP2R5EQ16537 467 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 ERMARDQ5T6L9 678 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 SDHAF4Q5VUM1 108 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 BTBD8Q5XKL5 378 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 SCYL2Q6P3W7 929 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 TMC7Q7Z402 723 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 BNIPLQ7Z465 357 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 SLC13A5Q86YT5 568 aaPredicted RBP12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 PSTKQ8IV42 348 aaKnown RBP12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 TCEAL8Q8IYN2 117 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 KCTD6Q8NC69 237 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 LRRN4CLQ8ND94 238 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 SPPL3Q8TCT6 385 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 PGAP3Q96FM1 320 aaPredicted RBP12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 SAMD11Q96NU1 681 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 EMILIN2Q9BXX0 1053 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 CRISPLD1Q9H336 500 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 ZWILCHQ9H900 591 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 SMARCAL1Q9NZC9 954 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 EFR3BQ9Y2G0 817 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 PCDHA11Q9Y5I1 949 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 IRAK3Q9Y616 596 aa12.8□□□□□ -0.36
TGFBR3-211ENST00000533370 GOLGA6L10A0A0M3HER8 536 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 SLC38A8A6NNN8 435 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 CCDC188H7C350 402 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 M0QYT0 321 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 TEX28O15482 410 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 SEC24AO95486 1093 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 C1RP00736 705 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 KRT1P04264 644 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 RARAP10276 462 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 KDELR1P24390 212 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 DNAJB2P25686 324 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 GBP1P32455 592 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 RDXP35241 583 aaKnown RBP12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 ALDH1A3P47895 512 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 SULT1E1P49888 294 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 DEUP1Q05D60 604 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 SMC1AQ14683 1233 aaKnown RBP12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 PDK2Q15119 407 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 CDO1Q16878 200 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 TXNRD3NBQ6F5E7 133 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 AADACL2Q6P093 401 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 SCD5Q86SK9 330 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 CCDC50Q8IVM0 306 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 MAP7D3Q8IWC1 876 aa12.79□□□□□ -0.36
TGFBR3-211ENST00000533370 TTC9BQ8N6N2 239 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms