RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 IQCB1Q15051 598 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 SKOR2Q2VWA4 1001 aaPredicted RBP21.48■■□□□ 1.03
CCS-208ENST00000533244 FKBP15Q5T1M5 1219 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 DENND1BQ6P3S1 775 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 PRSS33Q8NF86 280 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 TTC8Q8TAM2 541 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 ATP2A3Q93084 1043 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 CDK5RAP1Q96SZ6 601 aaKnown RBP21.48■■□□□ 1.03
CCS-208ENST00000533244 KLF16Q9BXK1 252 aaPredicted RBP21.48■■□□□ 1.03
CCS-208ENST00000533244 LINC00597Q9H2U6 94 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 ECT2Q9H8V3 914 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 GALR2O43603 387 aaPredicted RBP21.47■■□□□ 1.03
CCS-208ENST00000533244 GREM1O60565 184 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 PNMA6AP0CW24 399 aaPredicted RBP21.47■■□□□ 1.03
CCS-208ENST00000533244 RALAP11233 206 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 USP8P40818 1118 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 RGS7P49802 495 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 DAOAP59103 153 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 YWHAGP61981 247 aaKnown RBP eCLIP21.47■■□□□ 1.03
CCS-208ENST00000533244 DRAP1Q14919 205 aaPredicted RBP21.47■■□□□ 1.03
CCS-208ENST00000533244 TADA2BQ86TJ2 420 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 SIX6OS1Q8N1H7 587 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 CPA6Q8N4T0 437 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 TTC16Q8NEE8 873 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 STK32AQ8WU08 396 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 NACA2Q9H009 215 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 PCDHGC3Q9UN70 934 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 CACNA1HO95180 2353 aa21.47■■□□□ 1.03
CCS-208ENST00000533244 SMTNL1A8MU46 457 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 CDK11BP21127 795 aaKnown RBP21.46■■□□□ 1.03
CCS-208ENST00000533244 MAGEA9P43362 315 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 RPS9P46781 194 aaKnown RBP21.46■■□□□ 1.03
CCS-208ENST00000533244 KLK7P49862 253 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 DTWD2Q8NBA8 298 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 IRGQQ8WZA9 623 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 NDRG1Q92597 394 aaKnown RBP21.46■■□□□ 1.03
CCS-208ENST00000533244 WBP2Q969T9 261 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 CYTH4Q9UIA0 394 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 DNMT3LQ9UJW3 386 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 NUDT5Q9UKK9 219 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 DAAM1Q9Y4D1 1078 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 YJEFN3A6XGL0 299 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 E7ENQ6 273 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 SLC9A3R1O14745 358 aaPredicted RBP21.46■■□□□ 1.03
CCS-208ENST00000533244 MDM4O15151 490 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 NFATC1O95644 943 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 LCP1P13796 627 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 PTK2Q05397 1052 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 RAPGEF1Q13905 1077 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 C10orf120Q5SQS8 335 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 SLC47A2Q86VL8 602 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 ADGRG2Q8IZP9 1017 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 OTUB2Q96DC9 234 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 ERGIC2Q96RQ1 377 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 SLC4A5Q9BY07 1137 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 STK33Q9BYT3 514 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 TBC1D14Q9P2M4 693 aa21.46■■□□□ 1.03
CCS-208ENST00000533244 NDRG2Q9UN36 371 aaKnown RBP21.46■■□□□ 1.03
CCS-208ENST00000533244 F8VZ95 297 aa21.45■■□□□ 1.02
CCS-208ENST00000533244 EPHB6O15197 1021 aa21.45■■□□□ 1.02
CCS-208ENST00000533244 NCAM2O15394 837 aa21.45■■□□□ 1.02
CCS-208ENST00000533244 CHRNB1P11230 501 aa21.45■■□□□ 1.02
CCS-208ENST00000533244 GJA4P35212 333 aa21.45■■□□□ 1.02
CCS-208ENST00000533244 TCF15Q12870 199 aa21.45■■□□□ 1.02
CCS-208ENST00000533244 SYCP1Q15431 976 aa21.45■■□□□ 1.02
CCS-208ENST00000533244 ZSCAN23Q3MJ62 389 aa21.45■■□□□ 1.02
CCS-208ENST00000533244 HTR3DQ70Z44 454 aa21.45■■□□□ 1.02
CCS-208ENST00000533244 SH3BP1Q9Y3L3 701 aa21.45■■□□□ 1.02
CCS-208ENST00000533244 FBXO21O94952 628 aa21.44■■□□□ 1.02
CCS-208ENST00000533244 CYP17A1P05093 508 aa21.44■■□□□ 1.02
CCS-208ENST00000533244 ACADSBP45954 432 aa21.44■■□□□ 1.02
CCS-208ENST00000533244 BPIFB4P59827 614 aa21.44■■□□□ 1.02
CCS-208ENST00000533244 GAB4Q2WGN9 574 aa21.44■■□□□ 1.02
CCS-208ENST00000533244 BSPRYQ5W0U4 402 aa21.44■■□□□ 1.02
CCS-208ENST00000533244 TMEM110Q86TL2 294 aa21.44■■□□□ 1.02
CCS-208ENST00000533244 WDTC1Q8N5D0 677 aa21.44■■□□□ 1.02
CCS-208ENST00000533244 LHX5Q9H2C1 402 aa21.44■■□□□ 1.02
CCS-208ENST00000533244 FAM207AQ9NSI2 230 aaPredicted RBP21.44■■□□□ 1.02
CCS-208ENST00000533244 PIK3R2O00459 728 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 TRDMT1O14717 391 aaKnown RBP21.43■■□□□ 1.02
CCS-208ENST00000533244 SCAMP3O14828 347 aaKnown RBP21.43■■□□□ 1.02
CCS-208ENST00000533244 IRF1P10914 325 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 JAM2P57087 298 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 AMPD2Q01433 879 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 UBXN1Q04323 297 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 GOLGA8FQ08AF8 430 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 GOLGA8DPQ0D2H9 430 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 PDCLQ13371 301 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 CCINQ13939 588 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 PON2Q15165 354 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 BTBD8Q5XKL5 378 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 BBS7Q8IWZ6 715 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 CLEC4CQ8WTT0 213 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 CBX8Q9HC52 389 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 ABCC13Q9NSE7 274 aa21.43■■□□□ 1.02
CCS-208ENST00000533244 OLA1Q9NTK5 396 aaKnown RBP21.43■■□□□ 1.02
CCS-208ENST00000533244 STC2O76061 302 aa21.42■■□□□ 1.02
CCS-208ENST00000533244 PTPN5P54829 565 aa21.42■■□□□ 1.02
CCS-208ENST00000533244 POLR2FP61218 127 aaKnown RBP21.42■■□□□ 1.02
CCS-208ENST00000533244 EFEMP1Q12805 493 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms