RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 OLFML1Q6UWY5 402 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 ZDHHC14Q8IZN3 488 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 SIX6OS1Q8N1H7 587 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 SCAMP5Q8TAC9 235 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.36■□□□□ 0.69
SMPD1-208ENST00000533123 IP6K2Q9UHH9 426 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 ESYT3A0FGR9 886 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 TRIM66O15016 1216 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 SART1O43290 800 aaKnown RBP19.35■□□□□ 0.69
SMPD1-208ENST00000533123 ERLIN1O75477 346 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 GRAP2O75791 330 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 SASH3O75995 380 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 HEXIM1O94992 359 aaKnown RBP19.35■□□□□ 0.69
SMPD1-208ENST00000533123 SPATA31D3P0C874 917 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 KRT3P12035 628 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 GJC1P36383 396 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 SSR1P43307 286 aaKnown RBP19.35■□□□□ 0.69
SMPD1-208ENST00000533123 IFRD2Q12894 506 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-208ENST00000533123 TPGS2Q68CL5 300 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 SPATA31D4Q6ZUB0 917 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 JOSD2Q8TAC2 188 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 KLHL5Q96PQ7 755 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 CYP4F11Q9HBI6 524 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 PNPLA8Q9NP80 782 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 METTL5Q9NRN9 209 aaKnown RBP19.35■□□□□ 0.69
SMPD1-208ENST00000533123 CCDC188H7C350 402 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 RFC1P35251 1148 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-208ENST00000533123 SLC5A3P53794 718 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 GSCP56915 257 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-208ENST00000533123 SLC6A3Q01959 620 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 CCNI2Q6ZMN8 369 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-208ENST00000533123 C8orf48Q96LL4 319 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 ULBP1Q9BZM6 244 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 NGRNQ9NPE2 291 aaKnown RBP19.35■□□□□ 0.69
SMPD1-208ENST00000533123 AMACRQ9UHK6 382 aa19.35■□□□□ 0.69
SMPD1-208ENST00000533123 TRIOBPQ9H2D6 2365 aa19.34■□□□□ 0.69
SMPD1-208ENST00000533123 SIGLEC16A6NMB1 481 aa19.34■□□□□ 0.69
SMPD1-208ENST00000533123 TNFRSF10BO14763 440 aa19.34■□□□□ 0.69
SMPD1-208ENST00000533123 USP17L7P0C7H9 530 aa19.34■□□□□ 0.69
SMPD1-208ENST00000533123 KLRC2P26717 231 aa19.34■□□□□ 0.69
SMPD1-208ENST00000533123 GUCY2DQ02846 1103 aa19.34■□□□□ 0.69
SMPD1-208ENST00000533123 MLLT1Q03111 559 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-208ENST00000533123 NAP1L3Q99457 506 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-208ENST00000533123 EMILIN2Q9BXX0 1053 aa19.34■□□□□ 0.69
SMPD1-208ENST00000533123 TGM5O43548 720 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 ADH1AP07327 375 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 MCM3P25205 808 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 MAN1A1P33908 653 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 TRADDQ15628 312 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 ZDHHC17Q8IUH5 632 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 EMC1Q8N766 993 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 TIFAQ96CG3 184 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 GDAP1L1Q96MZ0 367 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 FUT8Q9BYC5 575 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 KLHL11Q9NVR0 708 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 SZT2Q5T011 3432 aa19.33■□□□□ 0.69
SMPD1-208ENST00000533123 EPOPA6NHQ4 379 aa19.33■□□□□ 0.68
SMPD1-208ENST00000533123 FSCN2O14926 492 aa19.33■□□□□ 0.68
SMPD1-208ENST00000533123 ATF6P18850 670 aa19.33■□□□□ 0.68
SMPD1-208ENST00000533123 TUFMP49411 452 aaKnown RBP19.33■□□□□ 0.68
SMPD1-208ENST00000533123 MRPS5P82675 430 aaKnown RBP19.33■□□□□ 0.68
SMPD1-208ENST00000533123 SLC13A5Q86YT5 568 aaPredicted RBP19.33■□□□□ 0.68
SMPD1-208ENST00000533123 RHOT1Q8IXI2 618 aa19.33■□□□□ 0.68
SMPD1-208ENST00000533123 GIPC2Q8TF65 315 aa19.33■□□□□ 0.68
SMPD1-208ENST00000533123 GDPD5Q8WTR4 605 aa19.33■□□□□ 0.68
SMPD1-208ENST00000533123 KHSRPQ92945 711 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMPD1-208ENST00000533123 EPB41L5Q9HCM4 733 aa19.33■□□□□ 0.68
SMPD1-208ENST00000533123 CNGB3Q9NQW8 809 aa19.33■□□□□ 0.68
SMPD1-208ENST00000533123 PRRG1O14668 218 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 ZBED1O96006 694 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 ELF1P32519 619 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 NUP93Q8N1F7 819 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 HERPUD2Q9BSE4 406 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 GOLGA6L10A0A0M3HER8 536 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 PSTPIP1O43586 416 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 LPXNO60711 386 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 USP46P62068 366 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 RPL10AP62906 217 aaKnown RBP19.32■□□□□ 0.68
SMPD1-208ENST00000533123 MTMR3Q13615 1198 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 ATP13A4Q4VNC1 1196 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 DENND5BQ6ZUT9 1274 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 PRELID2Q8N945 189 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 FAM149B1Q96BN6 582 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMPD1-208ENST00000533123 USP3Q9Y6I4 520 aa19.32■□□□□ 0.68
SMPD1-208ENST00000533123 YJEFN3A6XGL0 299 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 E7ENQ6 273 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 RFXAPO00287 272 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 TTI1O43156 1089 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 DAOAP59103 153 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 SMAD3P84022 425 aaKnown RBP19.31■□□□□ 0.68
SMPD1-208ENST00000533123 TXNRD3NBQ6F5E7 133 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 ANKS1BQ7Z6G8 1248 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 RUBCNQ92622 972 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 ZBTB9Q96C00 473 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 GDF3Q9NR23 364 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 HSFX1Q9UBD0 423 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 PATJQ8NI35 1801 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 FBXO21O94952 628 aa19.31■□□□□ 0.68
SMPD1-208ENST00000533123 PSMA2P25787 234 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms