RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 GPSM3Q9Y4H4 160 aa13.8□□□□□ -0.2
COPB1-209ENST00000533096 FRMD3A2A2Y4 597 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 MEI4A8MW99 385 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 AP1G2O75843 785 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 ZIC2O95409 532 aaPredicted RBP13.79□□□□□ -0.2
COPB1-209ENST00000533096 CAPNS1P04632 268 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 FAM163BP0C2L3 166 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 CASP4P49662 377 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 MAP3K7CLP57077 242 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 SCARA5Q6ZMJ2 495 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 CCNI2Q6ZMN8 369 aaPredicted RBP13.79□□□□□ -0.2
COPB1-209ENST00000533096 PAQR9Q6ZVX9 377 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 HTR3DQ70Z44 454 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 OVCA2Q8WZ82 227 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 TOE1Q96GM8 510 aaKnown RBP13.79□□□□□ -0.2
COPB1-209ENST00000533096 CGRRF1Q99675 332 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 IL21RQ9HBE5 538 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
COPB1-209ENST00000533096 WDR35Q9P2L0 1181 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 SUSD2Q9UGT4 822 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 RAXQ9Y2V3 346 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 ATP8B3O60423 1300 aa13.79□□□□□ -0.2
COPB1-209ENST00000533096 ATRXP46100 2492 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 EIF4E1BA6NMX2 242 aaKnown RBP13.78□□□□□ -0.2
COPB1-209ENST00000533096 MDM4O15151 490 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 TLR5O60602 858 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 BEST1O76090 585 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 CCDC130P13994 396 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 CD6P30203 668 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 ATP5C1P36542 298 aaKnown RBP13.78□□□□□ -0.2
COPB1-209ENST00000533096 DGKGP49619 791 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 ASIC1P78348 528 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 CYP24A1Q07973 514 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 GRIK2Q13002 908 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 PSMD6Q15008 389 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 C8orf34Q49A92 452 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 FAM35AQ86V20 835 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 ZCCHC9Q8N567 271 aaKnown RBP13.78□□□□□ -0.2
COPB1-209ENST00000533096 XXYLT1Q8NBI6 393 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 RHBDD1Q8TEB9 315 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 FOXJ1Q92949 421 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 TNIP3Q96KP6 325 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 KLF16Q9BXK1 252 aaPredicted RBP13.78□□□□□ -0.2
COPB1-209ENST00000533096 GAREM1Q9H706 876 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.78□□□□□ -0.27e-6■■■■■ 74.5
COPB1-209ENST00000533096 AGPAT3Q9NRZ7 376 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 LSM7Q9UK45 103 aaKnown RBP13.78□□□□□ -0.2
COPB1-209ENST00000533096 STON1Q9Y6Q2 735 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 TSC2P49815 1807 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 EML5Q05BV3 1969 aa13.78□□□□□ -0.2
COPB1-209ENST00000533096 TGFB1I1O43294 461 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 GJB3O75712 270 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 NCAM1P13591 858 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 ADORA2BP29275 332 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 ATICP31939 592 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 STARD3Q14849 445 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 ZNF667Q5HYK9 610 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 SNX30Q5VWJ9 437 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 THADAQ6YHU6 1953 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 FAM124AQ86V42 546 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 CACUL1Q86Y37 369 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 ZNF507Q8TCN5 953 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 SLC2A14Q8TDB8 520 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 SYAP1Q96A49 352 aaPredicted RBP13.77□□□□□ -0.21
COPB1-209ENST00000533096 SMARCD1Q96GM5 515 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 SMOQ99835 787 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 GABRG3Q99928 467 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 LRRC27Q9C0I9 530 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 SDCBP2Q9H190 292 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 TLR8Q9NR97 1041 aaKnown RBP13.77□□□□□ -0.21
COPB1-209ENST00000533096 KRT82Q9NSB4 513 aa13.77□□□□□ -0.21
COPB1-209ENST00000533096 BAHCC1Q9P281 2608 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 A0A1B0GTW7 788 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 KCNK3O14649 394 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 EXOC3O60645 756 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 KIF20AO95235 890 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 HMBSP08397 361 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 CISD3P0C7P0 127 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 ZDHHC11BP0C7U3 371 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 CYP4F3Q08477 520 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 GOLGA8FQ08AF8 430 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 GOLGA8DPQ0D2H9 430 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 HLA-BQ31612 363 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 ZNF699Q32M78 642 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 FUT11Q495W5 492 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 C10orf120Q5SQS8 335 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 TMPRSS6Q8IU80 811 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 FUKQ8N0W3 1084 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 C12orf29Q8N999 325 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 DHX58Q96C10 678 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 USP28Q96RU2 1077 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 XYLT2Q9H1B5 865 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 ITM2CQ9NQX7 267 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 TM7SF3Q9NS93 570 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 FAM49BQ9NUQ9 324 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 COMMD8Q9NX08 183 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 WSB2Q9NYS7 404 aaPredicted RBP13.76□□□□□ -0.21
COPB1-209ENST00000533096 IL37Q9NZH6 218 aa13.76□□□□□ -0.21
COPB1-209ENST00000533096 EIF2B4Q9UI10 523 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms