RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 FAM149B1Q96BN6 582 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 VCPIP1Q96JH7 1222 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 CCDC42Q96M95 316 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 ASB16Q96NS5 453 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 PPP1R9BQ96SB3 815 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 RNF38Q9H0F5 515 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 CCSER2Q9H7U1 834 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZFP14Q9HCL3 533 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 OSER1Q9NX31 292 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 WDR35Q9P2L0 1181 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 TJP2Q9UDY2 1190 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 DNMT3LQ9UJW3 386 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 STRIP2Q9ULQ0 834 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 SSU72P8A0A1W2PR75 194 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 C19orf67A6NJJ6 358 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 AKR1B10O60218 316 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 RTN2O75298 545 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 TBX18O95935 607 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 FTLP02792 175 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 CALB1P05937 261 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 MBL2P11226 248 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 NCAM1P13591 858 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLC7A9P82251 487 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 C2CD6Q53TS8 623 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 C10orf120Q5SQS8 335 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 TANGO2Q6ICL3 276 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 PARM1Q6UWI2 310 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 FAM183BPQ6ZVS7 135 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 BEND5Q7L4P6 421 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 XYLT1Q86Y38 959 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 CELF5Q8N6W0 485 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 EDEM1Q92611 657 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 ELSPBP1Q96BH3 223 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 PANX2Q96RD6 677 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLC22A12Q96S37 553 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 CHP1Q99653 195 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 C11orf70Q9BRQ4 267 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 NHEJ1Q9H9Q4 299 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 TRPV4Q9HBA0 871 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 POPDC2Q9HBU9 364 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 OLA1Q9NTK5 396 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 TDP1Q9NUW8 608 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 ASNSD1Q9NWL6 643 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 IGSF9Q9P2J2 1179 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 NUDT5Q9UKK9 219 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 ARHGAP26Q9UNA1 814 aa11.77□□□□□ -0.53
TRAPPC4-211ENST00000533012 A0A087X0T9 212 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 ANHXE9PGG2 379 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 HSF2BPO75031 334 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 ECI2O75521 394 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 OLFM2O95897 454 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 FAM228BP0C875 321 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 SCNN1AP37088 669 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 VIPR2P41587 438 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 GSDMDP57764 484 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 RNASE9P60153 205 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 EFEMP1Q12805 493 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 PTP4A2Q12974 167 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 TAF5Q15542 800 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 CCDC122Q5T0U0 273 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 ALKBH5Q6P6C2 394 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 OLFML1Q6UWY5 402 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 HFE2Q6ZVN8 426 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLC26A9Q7LBE3 791 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 MCOLN2Q8IZK6 566 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 GJD3Q8N144 294 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 ST13P5Q8NFI4 369 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 FGF14Q92915 247 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 USP13Q92995 863 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 SMG9Q9H0W8 520 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 ISCUQ9H1K1 167 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 KIF9Q9HAQ2 790 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 KCNK12Q9HB15 430 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 OBP2AQ9NY56 170 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 TAS2R14Q9NYV8 317 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 NAALADL1Q9UQQ1 740 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 NUMBLQ9Y6R0 609 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 PTPRDP23468 1912 aa11.76□□□□□ -0.53
TRAPPC4-211ENST00000533012 HEPACAM2A8MVW5 462 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 GOLGA8SH3BPF8 625 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 GRAP2O75791 330 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 FYNP06241 537 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 MYBL1P10243 752 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 NOS2P35228 1153 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 KPNA1P52294 538 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 COG7P83436 770 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 GFPT1Q06210 699 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 HTR4Q13639 388 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 SLC18A3Q16572 532 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 ASTE1Q2TB18 679 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 DCAF6Q58WW2 860 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 FAM102AQ5T9C2 384 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 MON1BQ7L1V2 547 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 PHLDB2Q86SQ0 1253 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 DDX42Q86XP3 938 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 MIB1Q86YT6 1006 aa11.75□□□□□ -0.53
TRAPPC4-211ENST00000533012 TMTC1Q8IUR5 882 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms