RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 C10orf120Q5SQS8 335 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 NAIF1Q69YI7 327 aaPredicted RBP16.15■□□□□ 0.18
CPSF1-210ENST00000532935 FSTL4Q6MZW2 842 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 TADA2BQ86TJ2 420 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 ADGRG2Q8IZP9 1017 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 ARHGAP18Q8N392 663 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 SLC35F5Q8WV83 523 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 KCTD13Q8WZ19 329 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 SECISBP2LQ93073 1101 aaKnown RBP16.15■□□□□ 0.18
CPSF1-210ENST00000532935 WBP2Q969T9 261 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 CDK5RAP1Q96SZ6 601 aaKnown RBP16.15■□□□□ 0.18
CPSF1-210ENST00000532935 P2RY13Q9BPV8 354 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 ULBP1Q9BZM6 244 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 DNMT3LQ9UJW3 386 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 FBXO4Q9UKT5 387 aa16.15■□□□□ 0.18
CPSF1-210ENST00000532935 NBL1P41271 181 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 GALK1P51570 392 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 YWHAGP61981 247 aaKnown RBP eCLIP16.14■□□□□ 0.17
CPSF1-210ENST00000532935 GOLGA8FQ08AF8 430 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 GOLGA8DPQ0D2H9 430 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 ADIGQ0VDE8 80 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 GAS6Q14393 721 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 DHCR24Q15392 516 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 MAMSTRQ6ZN01 415 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 Q6ZS52 159 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 C11orf57Q6ZUT1 292 aaPredicted RBP16.14■□□□□ 0.17
CPSF1-210ENST00000532935 BHLHA9Q7RTU4 235 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 SIX6OS1Q8N1H7 587 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 SYNPOQ8N3V7 929 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 NDRG1Q92597 394 aaKnown RBP16.14■□□□□ 0.17
CPSF1-210ENST00000532935 EXOC4Q96A65 974 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 OTUB2Q96DC9 234 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 FBRSL1Q9HCM7 1045 aaKnown RBP16.14■□□□□ 0.17
CPSF1-210ENST00000532935 SIX2Q9NPC8 291 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 PRMT8Q9NR22 394 aaPredicted RBP16.14■□□□□ 0.17
CPSF1-210ENST00000532935 TMEM63CQ9P1W3 806 aa16.14■□□□□ 0.17
CPSF1-210ENST00000532935 ZFHX2Q9C0A1 2572 aaPredicted RBP16.13■□□□□ 0.17
CPSF1-210ENST00000532935 BECN2A8MW95 431 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 PES1O00541 588 aaKnown RBP16.13■□□□□ 0.17
CPSF1-210ENST00000532935 EGFP01133 1207 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 DRD1P21728 446 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 GNA15P30679 374 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 RGS7P49802 495 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 CSTF1Q05048 431 aaKnown RBP16.13■□□□□ 0.17
CPSF1-210ENST00000532935 GAB4Q2WGN9 574 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 ZNF528Q3MIS6 628 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 CDKAL1Q5VV42 579 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 PMF1Q6P1K2 205 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 RHBDF2Q6PJF5 856 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 HTR3DQ70Z44 454 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 MIB1Q86YT6 1006 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 BBS7Q8IWZ6 715 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 SPEM1Q8N4L4 309 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 SHC3Q92529 594 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 CD101Q93033 1021 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 CNGB3Q9NQW8 809 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 TAB2Q9NYJ8 693 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 LSM7Q9UK45 103 aaKnown RBP16.13■□□□□ 0.17
CPSF1-210ENST00000532935 AJAP1Q9UKB5 411 aaPredicted RBP16.13■□□□□ 0.17
CPSF1-210ENST00000532935 FRYLO94915 3013 aa16.13■□□□□ 0.17
CPSF1-210ENST00000532935 PROB1E7EW31 1015 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 MED7O43513 233 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 GREM1O60565 184 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 GABBR2O75899 941 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 LETM1O95202 739 aaPredicted RBP16.12■□□□□ 0.17
CPSF1-210ENST00000532935 ADH1CP00326 375 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 ADH5P11766 374 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 LCP1P13796 627 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 HOXD11P31277 338 aaPredicted RBP16.12■□□□□ 0.17
CPSF1-210ENST00000532935 USP8P40818 1118 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 OPRD1P41143 372 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 MRE11P49959 708 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 CCR3P51677 355 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 EFEMP1Q12805 493 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 DPY19L2P1Q6NXN4 242 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 RSRC2Q7L4I2 434 aaKnown RBP16.12■□□□□ 0.17
CPSF1-210ENST00000532935 ALYREFQ86V81 257 aaKnown RBP16.12■□□□□ 0.17
CPSF1-210ENST00000532935 SCML4Q8N228 414 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 ZNF606Q8WXB4 792 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 HSFY1Q96LI6 401 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 ACP6Q9NPH0 428 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 FANCLQ9NW38 375 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 RASAL2Q9UJF2 1139 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 DNAJC12Q9UKB3 198 aa16.12■□□□□ 0.17
CPSF1-210ENST00000532935 YJEFN3A6XGL0 299 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 E7ENQ6 273 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 PIK3R2O00459 728 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 THAP12O43422 761 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 STC2O76061 302 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 GPD2P43304 727 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 CXCL12P48061 93 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 DAOAP59103 153 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 COG7P83436 770 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 SATB1Q01826 763 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 MYL5Q02045 173 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 TYRO3Q06418 890 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 KCNMA1Q12791 1236 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 PPP2R5DQ14738 602 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 KRT31Q15323 416 aa16.11■□□□□ 0.17
CPSF1-210ENST00000532935 MEA1Q16626 185 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms